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Table 3 Differentially expressed miRNAs between infected and non-infected lungs (P < 0.05, Q < 0.05 and Ratio > 2)

From: Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach

miRNA Position on chromosomes Reads in infected Reads in non-infected Ratio infected/non
-infected (Normalized)
gga-mir-1576 chr13:18532632-18532726 8 0 -1
gga-mir-1636 chr 15: 4729959-4730046 6 0 -
gga-mir-206 chr3: 110390439-110390514 101 9 20.38
gga-mir-1793 chr9: 25115521-25115617 25 5 8.36
gga-mir-1599 chr7: 25926968-25927029 48 13 6.71
gga-mir-1701 chr4: 82234261-82234337 27 9 5.45
gga-mir-449 chrZ: 16040613-16040698 38 14 4.93
gga-miR-140 chr11: 21030641-21030735 1438 803 3.25
gga-mir-1416 chrZ: 34596479-34596567 17 10 3.09
gga-mir-1458 chr9: 11743528-11743637 25 15 3.03
gga-mir-1612 chr9: 6031748-6031831 39 31 2.29
gga-mir-1a-1 chr20: 8107831- 8107901 551 471 2.12
gga-mir-1a-2 chr2: 105673483- 105673567 593 523 2.06
gga-mir-103-2 chr4: 91906889-91906971 49 148 0.49
gga-mir-99a chr1: 102424333-102424413 23 92 0.45
gga-mir-456 chr3: 32679710-32679821 30 122 0.45
gga-let-7c chr1: 102425086-102425169 735 3059 0.44
gga-mir-181b-2 chr17: 10220137- 10220221 20 89 0.41
gga-let-7j chr26: 1442697-1442779 648 2938 0.40
gga-mir-15b chr9: 23742966- 23743056 9 41 0.40
gga-let-7a-1 chr12: 6302911-6303000 658 3020 0.40
gga-let-7a-2 chr24: 3380993-3381064 671 3113 0.39
gga-let-7g chr12: 2809078-2809160 342 1623 0.38
gga-mir-181a-2 chr17: 10218497-10218587 57 283 0.37
gga-mir-200b chr21: 2585642-2585726 14 72 0.35
gga-let-7a-3 chr1: 73421272-73421347 892 4699 0.34
gga-mir-100 chr21: 3372894-3372973 15 79 0.34
gga-mir-30d chr2: 148337263-148337326 60 334 0.33
gga-mir-30e chr23: 5248414-5248509 20 112 0.32
gga-mir-181a-1 chr8: 2001561-2001664 65 366 0.32
gga-mir-181b-1 chr8: 2001750-2001838 18 106 0.31
gga-let-7k chr26: 1442897-1442979 53 327 0.29
gga-mir-125b chr1: 102457647-102457736 19 119 0.29
gga-mir-1b chr23: 4663912-4663975 10 63 0.29
gga-mir-146b chr6: 24570060-24570164 102 691 0.27
gga-mir-10a chrun_random: 379304-379377 86 598 0.26
gga-mir-101-2 chr8: 29051918-29051993 18 136 0.24
gga-mir-27b chrZ: 41157642-41157738 5 41 0.22
gga-mir-144 chr19: 5824123-5824207 11 94 0.21
gga-let-7f chr12: 6302497-6302583 947 8228 0.21
gga-mir-33-1 chr1: 51372282-51372350 2 19 0.19
gga-mir-126 chr17: 8431742-8431825 25 250 0.18
gga-mir-1456 chrZ: 44167486-44167595 2 20 0.18
gga-mir-22 chr19: 5352096- 5352195 4 43 0.17
gga-mir-16c chr4: 4048689- 4048759 6 65 0.17
gga-mir-30a-3p chr3: 85102239- 85102310 58 656 0.16
gga-mir-101 chrZ: 28037874- 28037952 19 219 0.16
gga-mir-30a-5p chr3: 85102239- 85102310 68 785 0.16
gga-mir-30c-1 chr23: 5249637-5249725 3 37 0.15
gga-mir-146c chr4: 92169271- 92169399 18 243 0.13
gga-mir-26a chr2: 4467516- 4467592 98 1326 0.13
gga-mir-451 chr19: 5823968-5824036 93 1287 0.13
gga-mir-146a chr13: 7555593- 7555691 7 105 0.12
gga-mir-21 chr19: 7322072-7322168 46 771 0.11
gga-mir-24 chrZ: 41158175-41158242 18 344 0.10
gga-mir-17-3p chr1: 152248781-152248865 2 44 0.08
gga-mir-20a chr1: 152248306-152248403 1 23 0.08
gga-mir-23b chrZ: 41157406-41157491 12 285 0.08
gga-mir-142-3p chr19: 496983-497070 2 49 0.07
gga-mir-142-5p chr19: 496983-497070 2 49 0.07
gga-mir-17-5p chr1: 152248781-152248865 2 55 0.07
gga-mir-19b chr1: 152248183-152248269 1 31 0.06
gga-mir-30c-2 chr3: 85126853-85126924 1 34 0.05
gga-mir-739   7 241 0.05
gga-mir-15c chr4: 4049055-4049130 1 46 0.04
gga-mir-15a chr1: 173700493-173700575 2 102 0.04
gga-mir-16-2 chr9: 23742791-23742884 1 67 0.03
gga-mir-16-1 chr1: 173700351-173700434 1 107 0.02
gga-mir-106 chr4: 3970359-3970439 0 27 +2
gga-mir-1729 chr15: 769596-769666 0 24 +
gga-mir-1798 chr20: 9654914-9655009 0 24 +
gga-mir-429 chr21: 2580812-2580895 0 22 +
gga-mir-1711 chr12: 17010140-17010207 0 18 +
  1. Note: 1 Specifically expressed in infected lungs.
  2. 2 Specifically expressed in non-infected lungs.