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Table 6 Differentially expressed miRNAs between non-infected lungs and tracheae (P < 0.05, Q < 0.05 and Ratio > 2)

From: Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach

miRNA Position on chromosomes Reads in lungs Reads in tracheae Ratio lung/trachea (Normalized)
gga-mir-30c-2 chr3: 85126853-85126924 34 0 -1
gga-mir-19b chr1: 152248183-152248269 31 0 -
gga-mir-1798 chr20: 9654914-9655009 24 0 -
gga-mir-1456 chrZ: 44167486-44167595 20 0 -
gga-mir-1711 chr12: 17010140-17010207 18 0 -
gga-mir-122-1 chrZ: 649337-649413 17 0 -
gga-mir-203 chr:5: 53206814-53206911 16 0 -
gga-mir-122-2 chrurn_random: 12066796-12066872 14 0 -
gga-mir-1599 chr7: 25926968-25927029 13 0 -
gga-mir-1638 chr5: 58712377- 58712463 12 0 -
gga-mir-1761 chr8: 17523212-17523292 12 0 -
gga-mir-144 chr19: 5824123-5824207 94 2 23.63
gga-mir-146a chr13: 7555593- 7555691 105 3 17.60
gga-mir-739   241 7 17.31
gga-mir-106 chr4: 3970359-3970439 27 1 13.57
gga-mir-16-1 chr1: 173700351-173700434 107 4 13.45
gga-mir-193a chr18: 6423770-6423846 26 1 13.07
gga-mir-142-3p chr19: 496983-497070 49 2 12.32
gga-mir-142-5p chr19: 496983-497070 49 2 12.32
gga-mir-1729 chr15: 769596-769666 24 1 12.07
gga-mir-20a chr1: 152248306-152248403 23 1 11.56
gga-mir-21 chr19: 7322072-7322168 771 40 9.69
gga-mir-17-5p chr1: 152248781-152248865 55 3 9.22
gga-mir-16-2 chr9: 23742791-23742884 67 4 8.42
gga-mir-24 chrZ: 41158175-41158242 344 21 8.24
gga-mir-30e chr23: 5248414-5248509 112 7 8.04
gga-mir-15c chr4: 4049055-4049130 46 3 7.71
gga-mir-223 chr:4: 232949-233048 15 1 7.54
gga-mir-29a chr1: 3236329-3236417 15 1 7.54
gga-mir-29c chr26: 2511658-2511746 15 1 7.54
gga-mir-17-3p chr1: 152248781-152248865 55 3 7.37
gga-mir-451 chr19: 5823968-5824036 1287 89 7.27
gga-mir-101 chrZ: 28037874- 28037952 219 16 6.88
gga-mir-126 chr17: 8431742-8431825 250 19 6.61
gga-mir-26a chr2: 4467516- 4467592 1326 103 6.47
gga-mir-130c chr19: 7145027-7145120 25 2 6.28
gga-mir-23b chrZ: 41157406-41157491 285 23 6.23
gga-mir-30c-1 chr23: 5249637-5249725 37 3 6.20
gga-mir-193b chr14: 759453-759535 23 2 5.78
gga-mir-101-2 chr8: 29051918-29051993 136 12 5.70
gga-mir-15a chr1: 173700493-173700575 102 9 5.70
gga-let-7f chr12: 6302497-6302583 8228 781 5.30
gga-mir-27b chrZ: 41157642-41157738 41 4 5.15
gga-mir-30a-5p chr3: 85102239- 85102310 785 87 4.54
gga-mir-30a-3p chr3: 85102239- 85102310 656 76 4.34
gga-mir-16c chr4: 4048689- 4048759 65 8 4.08
gga-mir-181a-1 chr8: 2001561-2001664 366 49 3.76
gga-mir-200b chr21: 2585642-2585726 72 10 3.62
gga-mir-22 chr19: 5352096- 5352195 43 6 3.60
gga-let-7a-3 chr1: 73421272-73421347 3193 468 3.43
gga-mir-146c chr4: 92169271- 92169399 243 36 3.39
gga-mir-146b chr6: 24570060-24570164 691 107 3.25
gga-mir-181a-2 chr17: 10218497-10218587 283 45 3.16
gga-let-7k chr26: 1442897-1442979 327 54 3.04
gga-mir-15b chr9: 23742966- 23743056 41 7 2.94
gga-let-7a-2 chr24: 3380993-3381064 3113 540 2.89
gga-mir-99a chr1: 102424333-102424413 92 16 2.89
gga-mir-1b chr23: 4663912-4663975 63 11 2.88
gga-mir-199-1 chr17: 5667150-5667243 541 95 2.86
gga-mir-199-2 chr8: 4732773-4732880 541 95 2.86
gga-let-7a-1 chr12: 6302911-6303000 3020 532 2.85
gga-let-7a-3 chr1: 73421272-73421347 1506 266 2.85
gga-let-7j chr26: 1442697-1442779 2938 522 2.83
gga-mir-221 chr1: 114218926-114219024 129 23 2.82
gga-mir-128-1 chr7: 3222815032228231 43 8 2.70
gga-mir-125b chr1: 102457647-102457736 119 24 2.49
gga-mir-30d chr2: 148337263-148337326 344 68 2.47
gga-mir-103-2 chr4: 91906889-91906971 243 51 2.40
gga-let-7i chr1: 34895687-34895770 633 136 2.34
gga-mir-107 chr6: 20487964-20488044 77 17 2.28
gga-let-7c chr1: 102425086-102425169 3059 679 2.26
gga-mir-456 chr3: 32679710-32679821 122 28 2.19
gga-let-7g chr12: 2809078-2809160 1623 373 2.19
gga-mir-10a chrun_random: 379304-379377 598 139 2.16
gga-mir-181b-1 chr8: 2001750-2001838 106 25 2.13
gga-mir-181b-2 chr17: 10220137- 10220221 89 21 2.13
gga-mir-34b chr24: 5684900-5684983 337 82 2.07
gga-mir-206 chr3: 110390439-110390514 9 88 0.05
  1. Note: 1 Specifically expressed in non-infected lungs.