Table 1 Projected X-Equilibria.
From: Evolution of genomic sequence inhomogeneity at mid-range scales
Equilibrium for X-percentage computed from each substitution rate | ||||||
|---|---|---|---|---|---|---|
Type of region | Observed X -percentage | rare SNPs | minor SNPs | Medium SNPs | major SNPs | fixed substit. |
G-rich | 40% | 14.5% | 16.9% | 22.3% | 36.0% | 32.1% |
nonG-rich | 7% | 14.6 | 13.4 | 10.6 | 7.6 | 7.8 |
G-average | 20% | 17.1 | 18.0 | 19.2 | 23.0 | 22.2 |
C-rich | 40% | 13.8 | 16.9 | 23.0 | 33.90 | 32.4 |
nonC-rich | 7% | 14.5 | 12.7 | 10.2 | 8.0 | 7.8 |
C-average | 20% | 17.1 | 18.1 | 19.2 | 23.1 | 22.1 |
A-rich | 49.5% | 41.4 | 40.3 | 42.0 | 43.5 | 44.1 |
nonA-rich | 12.9% | 32.3 | 26.3 | 20.8 | 10.9 | 12.6 |
A-average | 29.4% | 34.1 | 32.6 | 30.7 | 26.0 | 27.0 |
T-rich | 49.5% | 39.5 | 39.5 | 42.8 | 43.2 | 44.6 |
nonT-rich | 12.9% | 33.4 | 27.3 | 19.9 | 11.5 | 12.6 |
T-average | 29.4% | 34.2 | 32.6 | 30.8 | 25.9 | 27.1 |
GT-rich | 69.8% | 56.9 | 60.7 | 64.6 | 70.8 | 70.4 |
nonGT-rich | 30.1% | 41.7 | 37.7 | 36.5 | 29.2 | 30.1 |
GT-average | 50.0% | 49.9 | 50.0 | 50.0 | 50.0 | 50.0 |
GA-rich | 70.0% | 56.6 | 56.6 | 60.0 | 63.2 | 65.8 |
nonGA-rich | 29.9% | 44.6 | 42.1 | 39.1 | 31.7 | 34.1 |
GA-average | 50.0% | 49.9 | 50.1 | 50.0 | 49.9 | 49.9 |
GC-rich | 71.3% | 26.4 | 31.7 | 39.5 | 56.1 | 60.6 |
nonGC-rich | 20.0% | 30.2 | 29.3 | 27.8 | 27.4 | 24.4 |
GC-average | 40.7% | 34.9 | 36.8 | 39.0 | 45.7 | 45.0 |