Table 2 Impact of Indels on X-rich MRI Regions, with X Representing Any Single Base. The impact of indels on X-rich MRI regions and on X-average regions, where X is for A-, T-, C-, or G-rich or poor. For each particular region we give the total length of examined regions in mega-bases, the percentage composition or content of X, the number of changes in X due to insertions and deletions (ΔX = N ins (X) - N del (X)), and the change in X composition due to both indels and substitutions.
From: Evolution of genomic sequence inhomogeneity at mid-range scales
| Â | A-rich | nonA-rich | A-average |
|---|---|---|---|
total length | 66.9 Mb | 72.4 Mb | 800.4 Mb |
content of A | 49.6% | 12.9% | 30.5% |
ΔA | -16850 | -7390 | -44182 |
ΔnonA | -24748 | -29257 | -98769 |
net A% change INDEL | 0.006% | -0.004% | -0.0001% |
net A% change SUBST | -0.027% | -0.002% | -0.014% |
| Â | T-rich | nonT-rich | T-average |
total length | 67.8 Mb | 71.1 Mb | 800.4 Mb |
content of T | 49.5% | 13.1% | 30.5% |
ΔT | -21849 | -7078 | -47238 |
ΔnonT | -24084 | -22716 | -97057 |
net T% change INDEL | 0.001% | -0.004% | -0.0004% |
net T% change SUBST | -0.024% | -0.002% | -0.013% |
| Â | G-rich | nonG-rich | G-average |
total length | 52.0 Mb | 60.4 Mb | 884.7 Mb |
content of G | 40.10% | 7.20% | 20.40% |
ΔG | -1185 | -7080 | -31780 |
ΔnonG | -12864 | -37512 | -139126 |
net G% change INDEL | 0.009% | -0.006% | 0.0003% |
net G% change SUBST | -0.052% | 0.009% | 0.016% |
| Â | C-rich | nonC-rich | C-average |
total length | 52.0 Mb | 60.4 Mb | 883.9 Mb |
content of C | 40.10% | 7.20% | 20.50% |
ΔC | -829 | -6700 | -33823 |
ΔnonC | -12418 | -35277 | -140331 |
net C% change INDEL | 0.009% | -0.006% | 0.0002% |
net C% change SUBST | -0.049% | 0.009% | 0.015% |