|  |  |  |  |  |  | Homologs |  | |||
---|---|---|---|---|---|---|---|---|---|---|---|
Namea | Lenb | Chrc | Expd | Target site(s) | Matche | G pf | S. p | S. c | A. t | H. s | Locationg |
Nc CD1 | 125 | III | C, N | 26S-Am2242 | 10/0 | D' | - | snR13 | - | - | Intron |
Nc CD2 | 99 | V | C | 26S-Um2379 | 13/0 | D' | snR66 | snR66 | - | - | IR |
Nc CD3 | 90 | I | C, N | 26S-Um2840 | 14/0 | D' | - | - | snoR29 | Â | Â |
Nc CD4 | 81 | V | C, N | 18S-Cm49 | 13/0 | D' | - | - | - | - | Intron |
Nc CD5 | 80 | VI | C | 26S-Am856 | 10/0 | D | snR60-I | snR72 | snoR72Y | - | Intron |
 |  |  |  | 26S-Um2383 | 12/0 | D' | snR78 | snR78 | snoR37 | U52 |  |
Nc CD6 | 76 | I | C | 26S-Um2687 | 11/0 | D' | snR51-I | snR51 | - | U41 | Exon |
Nc CD7 | 84 | VI | C | 26S-Gm2250 | 12/0 | D' | snR75 | snR75 | U15 | U15 | Intron |
Nc CD8 | 85 | I | C | 26S-Gm2751 | 13/0 | D' | snR48 | snR48 | - | U60 | IR |
Nc CD9 | 81 | I | C | 18S-Gm1122 | 14/0 | D | snR41-II | snR41 | - | - | Intron |
Nc CD10 | 104 | I | C, N | 26S-Um1039 | 12/0 | D | - | - | - | - | Intron |
 |  |  |  | 26S-Am3264 | 13/0 | D' | - | - | - | - |  |
Nc CD11 | 79 | I | C | 18S-Am793 | 13/0 | D' | snR53 | snR53 | snoR53Y | - | Intron |
 |  |  |  | U6-Am47 | 11/0 | D' | snR53 | - | - | mgU6-47 |  |
 |  |  |  | 26S-Am356 | 15/0 | D | - | - | - | - |  |
Nc CD12 | 85 | VI | C | 26S-Cm2159 | 10/0 | D' | - | snR76 | Ath119b | HBII-180 | Intron |
Nc CD13 | 84 | VI | C | 18S-Am538 | 12/0 | D | snR41-I | snR41 | snR41Y | U62A/B | Intron |
Nc CD14 | 75 | IV | C | 26S-Am2288 | 10/0 | D' | - | - | U79 | U79 | Intron |
Nc CD15 | 73 | I | C, N | 18S-Am159 | 11/0 | D' | - | - | - | - | Intron |
 |  |  |  | tRNAThr-Um114 | 12/1 | D | - | - | - | - |  |
Nc CD16 | 122 | II | C | 26S-Gm2357 | 13/0 | D' | snR81 | snR190 | - | HBII-99 | Intron |
 |  |  |  | 26S-Gm1907 |  | D' | - | - | - | U50 |  |
Nc CD17 | 73 | I | C | 18S-Am154 | 13/0 | D | - | - | - | U45A/C | Intron |
 |  |  |  | 26S-Gm2875 | 12/0 | D' | - | - | snoR34 | HBII-210 |  |
Nc CD18 | 88 | V | C, N | 18S-Cm1004 | 11/0 | D | snR79 | snR79 | - | - | Intron |
Nc CD19 | 75 | III | C | 18S-Gm1423 | 13/0 | D' | snR56 | snR56 | snoR19 | U25 | Intron |
Nc CD20 | 75 | VI | C, N | 26S-Um2372 | 13/0 | D | snR88 | - | snoR58 | - | Intron |
Nc CD21 | 69 | VI | C | 18S-Am28 | 13/0 | D' | snR74 | snR74 | U27 | U27 | Intron |
Nc CD22 | 79 | I | C | 26S-Um1866 | 14/0 | D' | snR62 | snR62 | U34 | U34 | Intron |
 |  |  |  | 18S-Um893 | 11/0 | D | - | - | - | - |  |
Nc CD23 | 72 | V | C, N | 26S-Gm2773 | 11/0 | D' | snR38 | snR38 | snoR38Y | snR38 | Intron |
Nc CD24 | 75 | VI | C | 18S-Um575 | 13/0 | D' | snR77 | snR77 | snoR77Y | HBII-135 | Intron |
 |  |  |  | U5-Am62 | 15/0 | D | - | - | - | - |  |
Nc CD25 | 81 | I | C, N | 26S-Am846 | 13/0 | D' | - | - | - | - | Intron |
Nc CD26 | 77 | I | C | U2-Gm183 | 11/0 | D' | - | - | - | - | Intron |
Nc CD27 | 85 | VI | C | 26S-Am2904 | 15/0 | D' | snR71 | snR71 | U29 | U29 | Intron |
 |  |  |  | 26S-Cm2906 | 15/0 | D' | snR69 | snR69 | snoR69Y | - |  |
Nc CD28 | 78 | II | C | 26S-Am1845 | 12/0 | D' | - | - | snoR33 | U95 | Intron |
 |  |  |  | 26S-Am1859 | 14/0 | D | - | - | - | - |  |
Nc CD29 | 101 | II | C | U2-Am31 | 16/0 | D | - | - | - | SCARNA9 | Intron |
 |  |  |  | 5.8S-Am42 | 14/0 | D' | - | - | snoR9 | - |  |
Nc CD30 | 84 | I | C, N | 18S-Cm584 | 12/0 | D' | - | - | - | - | IR |
Nc CD31 | 101 | VI | C, N | 26S-Cm2917 | 13/0 | D' | snR73 | snR73 | U35 | U35 | Intron |
Nc CD32 | 82 | VII | C | 18S-Am161 | 11/0 | D | - | - | snoR18 | U44 | Intron |
 |  |  |  | 18S-Um167 | 11/0 | D' | - | - | snoR122 | U45A/B |  |
Nc CD33 | 102 | III | C | 26S-Am2218 | 13/0 | D | snR63 | snR63 | U46 | U46 | Intron |
Nc CD34 | 69 | IV | C | 18S-Um1265 | 12/0 | D' | snR55 | snR55 | snoR34 | U33 | Intron |
Nc CD36 | 90 | I | C | 26S-Cm2299 | 10/0 | D' | snR64 | snR64 | snoR44 | U74 | Intron |
Nc CD37 | 97 | II | C | Cleavage | Â | Â | U14 | U14 | U14 | U14 | Intron |
 |  |  |  | 18S-Cm411 | 15/0 | D | U14 | U14 | U14 | U14 |  |
Nc CD38* | 80 | IV | C | 26S-Am1114 | 12/0 | D' | snR61 | snR61 | U38 | U38 | Intron |
 |  |  |  | 26S-Am2858 | 10/0 | D' | - | - | - | - |  |
Nc CD39 | 73 | I | C | 26S-Am897 | 13/0 | D' | snR83 | - | - | - | Intron |
 |  |  |  | 26S-Am375 | 11/0 | D | - | - | - | - |  |
Nc CD40 | 107 | IV | C, N | 26S-Am2062 | 11/0 | D' | - | - | - | - | Intron |
Nc CD41 | 72 | II | C | 18S-Gm1423 | 12/0 | D' | snR56 | snR56 | snoR19 | U25 | Intron |
 |  |  |  | 26S-Cm1489 | 12/0 | D | - | - | U49 | mgh28S-2409 |  |
Nc CD42* | 92 | II | N, R | 18S-Am417 | 12/0 | D | snR52 | snR52 | - | U83 | Intron |
Nc CD43 | 96 | VI | N, R | 18S-Gm559 | 11/0 | D' | snR80 | - | - | - | Intron |
Nc CD44 | 85 | IV | N, R | 18S-Um1227 | 15/0 | D' | snR82 | - | snoR14 | HBII-55 | Intron |
 |  |  |  | 26S-Cm776 | 11/0 | D | - | - | - | - |  |
Nc CD45 | 102 | I | N, R | 26S-Um3021 | 11/0 | D | - | - | - | - | IR |
Nc CD46A | 89 | VII | N, R | 26S-Am635 | 11/0 | D' | U18 | U18 | U18 | U18 | Intron |
Nc CD46B | 89 | I | N, R | 26S-Am635 | 12/0 | D' | U18 | U18 | U18 | U18 | Intron |
Nc CD47* | 75 | III | N, R | 26S-Gm785 | 16/0 | D | snR39b | snR39b | snR39BY | snR39b | Intron |
Nc CD48* | 91 | V | N, R | 26S-Am797 | 14/0 | D' | snR60-I | snR60 | U80 | U80/U77 | Intron |
 |  |  |  | 26S-Gm888 | 17/0 | D | snR60-II | snR60 | U80 | U80 |  |
Nc CD49 | 91 | I | N, R | 26S-Um2682 | 12/0 | D | - | snR67 | - | - | Intron |
 |  |  |  | 18S-Am971 | 13/0 | D' | snR54 | snR54 | U59 | U59A/B |  |
Nc CD50 | 98 | I | N, R | 26S-Cm1418 | 15/0 | D' | U24 | U24 | U24 | U24 | IR |
Nc CD51 | 87 | VII | N, R | 26S-Am1430 | 13/0 | D' | U24b | U24 | U24 | U76 | Intron |
Nc CD52 | 177 | VII | C, N | tRNA-Am43 | 11/0 | D' | - | - | - | - | IR |
 |  |  |  | tRNALeu-Am90 | 12/0 | D' | - | - | - | - |  |
Nc CD53 | 212 | IV | C, N | Orphan | Â | Â | - | - | - | - | IR |
Nc CD54 | 125 | V | C, N | 26S-Um667 | 10/0 | D | - | - | - | - | IR |
Nc CD55 | 137 | IV | C, N | Orphan | Â | Â | - | - | - | - | Intron |
Nc U3A | 262 | I | C, N | Cleavage | Â | Â | - | - | - | - | RE |
Nc U3A-2 | 184 | I | C, N | Â | Â | Â | - | - | - | - | RE |
Nc U3A-3 | 75 | I | C, N | Â | Â | Â | - | - | - | - | RE |
Nc U3B | 270 | I | C, N | Cleavage | Â | Â | - | - | - | - | RE |
Nc U3B-2 | 191 | I | C, N | Â | Â | Â | - | - | - | - | RE |
Nc U3C | 275 | II | - | Cleavage | Â | Â | - | - | - | - | RE |