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Table 3 Codon usage for 12 protein-coding genes of the mitochondrial genome of Rotaria rotatoria

From: Eurotatorian paraphyly: Revisiting phylogenetic relationships based on the complete mitochondrial genome sequence of Rotaria rotatoria (Bdelloidea: Rotifera: Syndermata)

Codon (aa) nc % Codon (aa) nc % Codon (aa) nc % Codon (aa) nc %
TTT(F) 319 9.5 TCT(S) 105 3.1 TAT(Y) 157 4.7 TGT(C) 32 1.0
TTC(F) 50 1.5 TCC(S) 7 0.2 TAC(Y) 20 0.6 TGC(C) 2 0.1
TTA(L) 367 11.0 TCA(S) 20 0.6 TAA(*) 8 0.2 TGA(W) 62 1.9
TTG(L) 79 2.4 TCG(S) 6 0.2 TAG(*) 2 0.1 TGG(W) 24 0.7
CTT(L) 58 1.7 CCT(P) 49 1.5 CAT(H) 49 1.5 CGT(R) 27 0.8
CTC(L) 3 0.1 CCC(P) 5 0.1 CAC(H) 1 0.0 CGC(R) 1 0.0
CTA(L) 42 1.3 CCA(P) 8 0.2 CAA(Q) 22 0.7 CGA(R) 7 0.2
CTG(L) 6 0.2 CCG(P) 4 0.1 CAG(Q) 12 0.4 CGG(R) 1 0.0
ATT(I) 267 8.0 ACT(T) 55 1.6 AAT(N) 92 2.7 AGT(S) 36 1.1
ATC(I) 23 0.7 ACC(T) 0 0.0 AAC(N) 13 0.4 AGC(S) 8 0.2
ATA(M) 180 5.4 ACA(T) 22 0.7 AAA(K) 56 1.7 AGA(S) 90 2.7
ATG(M) 74 2.2 ACG(T) 6 0.2 AAG(K) 39 1.2 AGG(S) 55 1.6
GTT(V) 147 4.4 GCT(A) 61 1.8 GAT(D) 68 2.0 GGT(G) 54 1.6
GTC(V) 19 0.6 GCC(A) 6 0.2 GAC(D) 9 0.3 GGC(G) 15 0.4
GTA(V) 126 3.8 GCA(A) 20 0.6 GAA(E) 44 1.3 GGA(G) 59 1.8
GTG(V) 38 1.1 GCG(A) 11 0.3 GAG(E) 36 1.1 GGG(G) 66 2.0
  1. The letter in parenthesis indicates one-letter abbreviation of the amino acids.
  2. * Stop (termination) codon.