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Table 2 Summary of best MIRA assembly results for 96 BACs in two sets and four reference BACs included in both sets.

From: De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley

set BAC largest contig
bp
sum of contigs >1 kb
bp
N50 for contigs >1 kb
bp
N80 for contigs >1 kb
bp
N90 for contigs >1 kb
bp
avg cov 0.5-10 kb 10-50 kb 50-100 kb >100 kb
1 all (48) 66,682 4,972,546 59,359 34,037 21,204 22× 488 61 34 4
2 all (48) 58,210 5,134,266 38,959 27,816 20,140 27× 546 97 24 3
both all (96) 62,466 10,106,812 48,945 30,926 20,671 24× 1.034 158 58 7
1 184G09 120,316 120,316 120,316 120,316 120,316 18× - - - 1
1 259I16 74,161 125,700 74,161 11,492 8,588 19× 4 2 1 -
1 631P08 95,649 100,966 95,649 95,649 95,649 22× 2 - 1 -
1 711N16 75,684 101,682 75,684 12,600 11,564 24× - 2 1 -
2 184G09 91,195 121,589 91,195 28,663 28,663 25× 1 1 1 -
2 259I16 44,395 131,950 10,249 7,210 5246 14× 9 4 - -
2 631P08 52,664 102,141 26,440 18,577 18,577 24× 3 2 1 -
2 711N16 28,312 115,582 15,998 15,998 11,527 31× 4 5 - -