Skip to main content

Table 2 GTDs B flanking sequences with similarity to ESTs in public databases

From: An Ac/Ds-mediated gene trap system for functional genomics in barley

F2 plant Length (bp) Organism Accession number E-valuea Similarity (%)
GT4/7 603 H. vulgare CB881303.1 6e-79 91
  517 H. vulgare CB880126 2e-97 89
GT29/1 561 H. vulgare CK566326 1e-09 89
  537 H. vulgare U43284CDS 9e-29 88
GT37/1 111 H. vulgare CA011566 1e-20 95
  378 H. vulgare CB864149 6e-26 98
GT41/1 678 H. vulgare BF620234 e-102 89
  376 H. vulgare CB867749 9e-22 94
GT41/9 304 T. aestivum CN010744 1e-66 88
  503 H. vulgare BF616808 6e-36 82
  327 H. vulgare AJ461421 1e-60 100
GT54/6 316 H. vulgare CD056550 e-149 97
  527 T. aestivum CV758685 3e-16 88
GT63/5 470 H. vulgare CB864987 e-108 93
  133 H. vulgare CB881931 4e-58 97
  124 H. vulgare BU966953 1e-11 94
  193 Z. mays DN560626 9e-83 95
GT82/4 292 H. vulgare AJ473098 2e-77 98
  356 T. aestivum BQ170291 2e-13 88
  1. aStatistical significance threshold for reporting matches against database sequences obtained after BLAST program search