Skip to main content

Table 2 GTDs B flanking sequences with similarity to ESTs in public databases

From: An Ac/Ds-mediated gene trap system for functional genomics in barley

F2 plant

Length (bp)

Organism

Accession number

E-valuea

Similarity (%)

GT4/7

603

H. vulgare

CB881303.1

6e-79

91

 

517

H. vulgare

CB880126

2e-97

89

GT29/1

561

H. vulgare

CK566326

1e-09

89

 

537

H. vulgare

U43284CDS

9e-29

88

GT37/1

111

H. vulgare

CA011566

1e-20

95

 

378

H. vulgare

CB864149

6e-26

98

GT41/1

678

H. vulgare

BF620234

e-102

89

 

376

H. vulgare

CB867749

9e-22

94

GT41/9

304

T. aestivum

CN010744

1e-66

88

 

503

H. vulgare

BF616808

6e-36

82

 

327

H. vulgare

AJ461421

1e-60

100

GT54/6

316

H. vulgare

CD056550

e-149

97

 

527

T. aestivum

CV758685

3e-16

88

GT63/5

470

H. vulgare

CB864987

e-108

93

 

133

H. vulgare

CB881931

4e-58

97

 

124

H. vulgare

BU966953

1e-11

94

 

193

Z. mays

DN560626

9e-83

95

GT82/4

292

H. vulgare

AJ473098

2e-77

98

 

356

T. aestivum

BQ170291

2e-13

88

  1. aStatistical significance threshold for reporting matches against database sequences obtained after BLAST program search