Table 1 Sequence data analysis results
Newbler1 | Newbler2 | Velvet | |
|---|---|---|---|
No. of contigs | 149,096 | 125,081 | |
No. of loci | 94,000 | 69,000 | |
Read coverage | 5.9× | 6.4× | |
Putative SNPs | 47,128 | 22,022 | 33,624 |
No. of contigs (SNPs) | 24,627 | 13,140 | 20,963 |
Newbler1 | Newbler2 | Velvet | |
|---|---|---|---|
No. of contigs | 149,096 | 125,081 | |
No. of loci | 94,000 | 69,000 | |
Read coverage | 5.9× | 6.4× | |
Putative SNPs | 47,128 | 22,022 | 33,624 |
No. of contigs (SNPs) | 24,627 | 13,140 | 20,963 |