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Table 4 Counts of reporters associated with a putative transcript not in RefSeq

From: Evaluating annotations of an Agilent expression chip suggests that many features cannot be interpreted

Eligible

NoID

Suppressed

No Alignment

Valid ID

10847

2114

845

285

7603

  1. The first column shows the number of reporters that did not have an alignment with a RefSeq RNA; these data are also shown as the fifth column of Table 2. The second column shows the number of reporters that had no discernible identifier in the annotation file. The third column shows the number of reporters for which the annotated identifier had been suppressed or removed in Entrez Nucleotide. The fourth column shows the number of reporters that did not align with the annotated sequence. The fifth column shows the number of reporters that could be associated with a putative transcript. Reporters that could be counted in more than one of the second through fourth columns are counted in the leftmost column.