Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey

BMC Genomics

Table 1 KOG-distribution of ESTs isolated from mycoparasitism (MP), mycelial growth (MG) and light induced sporulation (LC)

		MP	MG	LC	Total	Fraction
Cellular processes and signalling
M	M_cell wall membrane	16	23	17	56	0,26
N	N_cell motility	6	3	3	12	0,5
O	Posttranslational events	464	355	328	1147	0,4
T	Signalling	170	194	215	579	0,29
Y	nuclear structures	19	35	28	82	0,23
U	Secretion	149	159	162	470	0,31
V	V-defense	34	42	62	138	0,24
W	W-extracellular structures	6	14	14	34	0,17
Z	cytosceleton	135	95	152	382	0,35
Information storage and Processing
A	RNA processing	64	91	96	251	0,25
B	chromatin dynamics	76	72	77	225	0,33
J	protein synthesis	717	794	750	2261	0,32
K	Transcription factors	131	115	155	401	0,32
L	repair	41	32	50	123	0,33
Metabolism
C	energy metabolism	255	252	273	780	0,33
D	Cell cycle	52	67	88	207	0,25
E	Amino acid metabolism	192	92	128	412	0,46
I	Lipid metabolism	106	130	113	349	0,3
F	Nucleotide metabolism	60	88	45	193	0,31
G	Carbohydrate metabolism	126	163	171	460	0,27
P	Inorganic metabolism	63	97	76	236	0,24
	Total	2882	2913	3003	8798	average 0,306

ISSN: 1471-2164