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Table 2 The 25 most abundant InterPro domains for G. max and P. sojae probesets that cross-hybridized with H. glycines probes.

From: Sequence mining and transcript profiling to explore cyst nematode parasitism

G. max    P. sojae   
InterPro domain   Number of probesets InterPro domain   Number of probesets
Ubiquitin IPR000626 16 Sugar transporter superfamily IPR005829 3
Extensin-like protein IPR003883 9 EGF-like region IPR013032 3
Glutamine amidotransferase IPR000583 9 Peptidase S8 and S53 IPR000209 2
ATP-sulfurylase IPR002650 8 HMG-I and HMG-Y, DNA-binding IPR000637 2
Histone-fold IPR009072 6 TonB box, N-terminal IPR010916 2
Zinc finger, C2H2-type IPR007087 6 Penicillin-binding protein IPR012338 2
Major intrinsic protein IPR000425 5 Rhodopsin-like GPCR superfamily IPR000276 2
EGF-like region IPR013032 5 DEAD/DEAH box helicase IPR001410 2
DNA-binding WRKY IPR003657 4 Prefoldin IPR009053 2
Cytochrome c oxidase IPR000883 4 Helix-turn-helix, Fis-type IPR002197 2
Cupredoxin IPR008972 4 Zinc finger, C2H2-type IPR007087 2
Bet v I allergen IPR000916 3 Ctr copper transporter IPR007274 1
Chlorophyll A-B binding protein IPR001344 3 Glycoside hydrolase IPR001764 1
Orn/DAP/Arg decarboxylase 2 IPR000183 3 Zinc finger, RING-type IPR001841 1
No apical meristem (NAM) protein IPR003441 3 Protein prenyltransferase IPR002088 1
IQ calmodulin-binding region IPR000048 3 Whey acidic protein IPR008197 1
Zinc finger, RING-type IPR001841 3 Histone-fold IPR009072 1
BURP IPR004873 3 Ribosomal protein L10 IPR001790 1
Ribosomal protein L7Ae/L30e/S12e/Gadd45 IPR004038 3 Major facilitator superfamily MFS_1 IPR011701 1
UspA IPR006016 3 Phosphotransferase KptA/Tpt1 IPR002745 1
Ribosomal protein L32e IPR001515 3 Regulator of chromosome condensation IPR000408 1
Dehydrin IPR000167 3 Inositol 1, 3, 4-trisphosphate 56-kinase IPR008656 1
Thioredoxin-like fold IPR012336 3 Serine carboxypeptidase IPR001563 1
Thiamine pyrophosphate enzyme IPR011766 3 Na+ solute symporter IPR001734 1
DNA photolyase IPR005101 2 Fructose-bisphosphate aldolase IPR000741 1
  1. *As defined in Methods
  2. **FDR 5%