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Figure 10 | BMC Genomics

Figure 10

From: Genes and gene expression modules associated with caloric restriction and aging in the laboratory mouse

Figure 10

Relationship between caloric restriction and aging in liver, heart, muscle and the central nervous system. Association between ordered gene lists. The association between the effects of CR and aging were evaluated in (A) liver, (B) heart, (C) muscle and (D) central nervous system (hippocampus + cortex). The association was evaluated following the approach of Lottaz et al. (2006) [25]. For each tissue type, four ordered lists of genes were generated (abbreviated as: CRu, CRD, AGEu, AGED). The CRu list contained the 2,500 genes most strongly up regulated by CR, ordered according to the significance of this effect (i.e., most-to-least significant). Likewise, the CRD list contained the 2,500 genes most strongly down regulated by CR, ordered according to the significance of this effect (i.e., most-to-least significant). Similarly, the AGEU list contained the 2,500 genes most strongly up regulated with age, and the AGED list contained the 2,500 genes most strongly down regulated with age (ordered from most-to-least significant). In each panel, blue lines indicate the degree of overlap between CR and AGE gene lists, with respect to gene ranks between 1 and 2,500. On the right side of each panel, solid blue lines represent the overlap between CRU and AGEU, while dotted blue lines represent the overlap between CRUand AGED. On the left side of each panel, solid blue lines represent the overlap between CRD and AGED, while dotted blue lines represent the overlap between CRD and AGEU. Red bands in each plot correspond to 95% confidence intervals for the degree of overlap expected by chance (based on the hypergeometric distribution) (25). Given an inverse association between CR and aging, it is expected that dotted blue lines would fall above the region shown in red, whereas the solid blue lines would fall within (or below) the region shown in red.

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