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Table 5 Detection of anticipated aberrations across platforms for the 6 tumour samples

From: The pitfalls of platform comparison: DNA copy number array technologies assessed

 

T1975

T2701

T2704

T2706

T2707

T2714

Gain 8p

possibly 8q (all)

also 8q (all)

none

none

none

none, but gain on 8q (all but Nimb)

Gain 1q

all

all

 

all

none

all but Nimb

Loss 16q

partial (all)

and gain 16p (all)

none

and gain 16p (all)

none

none

Amp 8q24

all

all

none

none

none

all but Nimb

Amp 11q13

none

all

none

none

none

none

Amp 17q12

none

none

none

none

none

all

Amp 20q13

all

Affy and Agil

none

none

none

none

Del 13q14

all

all

none

none

none

none

Del 9p21

all but Nimb

all

none

none

none

none

Del 17p13

none

all

all

none

none

all

  1. The detection of anticipated aberrations in each of the 6 tumour samples is reported for each platform.