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Table 2 Study of Kozak sequences for correctly and mispredicted start codons.

From: Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation

POSITION NUCLEOTIDE correctly predicted AUG with CCC-like motif (1474) mispredicted AUG (364) corrected AUG and BLASTP validated (187) corrected AUG but not BLASTP validated (177) correctly predicted (117) and corrected (18) AUG with GGG-like motif
A       
T       
G       
+4 A 37.65 21.15 41.71 36.16 48.15
  T 10.92 22.53 10.16 11.86 7.41
  G 40.57 30.49 41.714 42.94 34.81
  C 10.85 25.82 6.42 9.04 9.63
+5 A 45.32 25.27 47.06 45.76 37.04
  T 19.54 28.57 14.44 15.82 27.41
  G 19.74 18.68 20.32 19.77 22.96
  C 15.4 27.47 18.18 18.64 12.59
+6 A 26.87 24.73 28.88 27.12 32.59
  T 23.47 32.14 20.86 23.16 23.7
  G 28.7 22.53 26.2 30.51 28.15
  C 20.96 20.6 24.06 19.21 15.56
  1. Nucleotide frequencies of occurrence downstream (+4 to +6) the ATG codons Significant nucleotide biases are indicated in bold