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Figure 4 | BMC Genomics

Figure 4

From: Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger

Figure 4

Example Gene Clusters with associated peptide identifications. Three example mappings of proteomics data to clusters via the gene models are shown. The images, generated using the BioPerl::Graphics module, are split into tracks with the top ruler representing the genomic scaffold and the first track coloured black highlighting the region covered by the cluster. The tracks below this represent all the gene models mapped to this cluster regardless of whether they have proteomics evidence or not. The yellow models correspond to those that are included in the filtered "best" gene model set; models not in the filtered set are coloured green. The final and bottommost track represents the peptides as mapped to the genome track and are coloured blue. Each example shows how the proteomics evidence in the form of significantly matched peptides can lend weight to support or refute the filtered gene model set.

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