Table 1 Affymetrix quality metrics for all fingerstick samples.
From: Whole genome transcript profiling from fingerstick blood samples: a comparison and feasibility study
Donor | Collection | Scale Factor | Background | % Present | GAPDH 3'/5' | B-actin 3'/5' |
|---|---|---|---|---|---|---|
1 | Fingerstick 1 | 4.51 | 31.1 | 44.7 | 32.2 | 158.6 |
1 | fingerstick 2 | 2.76 | 29.9 | 52.4 | 7.7 | 29.4 |
2 | fingerstick 1 | 2.58 | 31.9 | 52.8 | 6.6 | 13.3 |
2 | fingerstick 2 | 2.25 | 32.1 | 54.2 | 6.2 | 19.7 |
3 | fingerstick 1 | 2.70 | 30.8 | 52.7 | 4.3 | 6.6 |
3 | fingerstick 2 | 2.23 | 30.2 | 54.3 | 5.8 | 15.0 |
4 | fingerstick 1 | 2.77 | 31.2 | 53.1 | 5.3 | 8.8 |
4 | fingerstick 2 | 2.13 | 30.2 | 53.8 | 6.3 | 16.8 |
5 | fingerstick 1 | 2.82 | 29.7 | 53.3 | 4.9 | 6.9 |
5 | fingerstick 2 | 2.25 | 30.9 | 53.5 | 7.5 | 19.1 |
Average | 2.7 | 30.8 | 52.5 | 8.7 | 29.4 | |
SD | 0.7 | 0.8 | 2.8 | 8.3 | 45.9 |