Table 3 Novel predicted miRNA loci.
Sequence | Location | Count | Hairpin length | Predicted Targets |
|---|---|---|---|---|
TCTTTCCGAGTCCTCCCATACC | scaffold_155:237816..237837 | 147 | 171 | Yes |
TCGTAATGCTTCATTCTCACAA1a | scaffold_148:201299..201320 | 49 | 90 | Yes |
TCGAATTTGGGCTTGAGATTGa | LG_III:7559439..7559459 | 107 | 101 | Yes |
TTGTAAGGGAAGCCCACATGG3a | LG_I:1810419..1810439 | 971 | 119 | Yes |
TCTTGCTCAAATGAGTATTCCA1 | LG_XV:698203..698224 (miR828) | 55 | 148 | Yes |
TTCATTCCTCTTCCTAAAATGG1, 3 | LG_XII:8278996..8279017 | 647 | 142 | Yes |
TCTTGCTCAAATGAGTATTCCA | LG_XII:2137739..2137760 (miR828) | 55 | 146 | Yes |
CATCTGCAGACTACTTGCCTTa | LG_XIV:3657623..3657643 | 5 | 108 | Yes |
TTCATTCCTCTTCCTAAAATGG3 | scaffold_129:380652..380673 | 647 | 128 | Yes |
TCATGAATTCAACCTGATTGGa | LG_II:14180794..14180814 | 106 | 255 | No |
AGCTCCGAGCTCTAATTATGTGGG2 | LG_II:22547443..22547466 | 20 | 174 | No |
TTCCTACAGTTATGATGGCCC3a | LG_VI:6175922..6175942 | 18 | 115 | No |
TCTGTCGCTGGAAAGATGGTACa | LG_XVII:3400803..3400824 | 77 | 147 | No |
GGCATGAGGTGTTTGGCAAGA1a | LG_II:21846112..21846132 | 13 | 126 | No |
ATATGATGGGTCTCATTTAGTAGA | LG_XIV:2363320..2363343 | 32 | 240 | No |