Figure 6

One example of many-to-many Inparanoid ortholog groups where a SD event proceeded mouse-rat speciation. The Ensembl gene IDs of GOI are ENSMUSG00000001175 (Calm1mm), ENSMUSG00000019370 (Calm3mm), ENSMUSG00000036438 (Calm3xmm), ENSRNOG00000004060 (Calm1rn), ENSRNOG00000016770 (Calm3rn). The gene structures and neighboring gene orders of five Calm1 and Calm3 genes in mouse and rat genomes are shown. The event tree on the left side is predicted based on the local synteny. SD: segmental duplication. Genes are shown corresponding to the strand of GOI in order to show the homology between neighboring genes. Five digits gene IDs are the last five digits of Ensembl gene IDs. IDs in italic typeset are predicted ones. Homology between two neighboring genes are defined by Blastp E-value < 1e-5.