Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs

Table 4 New L. monocytogenes ncRNAs^a identified in this study

Description	Coordinates in 10403S	Length	10403S Average GEI^b	Δ*sigB* Average GEI^c
rli64	222952..223741	790	1.99	2.17
rli65	409956..410100	145	43.80	82.82
rli66	938236..938563	328	14.47	29.94
rli67	1393256..1393496	241	52.11	65.68
rli68	2020305..2020575	271	189.49	224.23
rli69	2305436..2305610	175	20.62	49.18
rli70	2370319..2370547	229	45.73	17.84

^aNone of the ncRNAs in this table had matches in the Rfam database;
^bAverage normalized number of reads matching each of the σ^B-dependent genes in the two 10403S datasets divided by the length of the genes times 100 bp;
^cAverage normalized number of reads matching each of the σ^B-dependent genes in the two ΔsigB datasets divided by the length of the genes times 100 bp.