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Table 5 Putative new microRNAs

From: MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana

sRNA

Sequence

Target

Accession

Cleavage

ath-MIR2933a

GAAATCGGAGAGGAAATTCGCC

CPUORF

AT5G09460

Not tested

ath-MIR2933b

GAAATCGGAGAGGAAATTCGCC

CPUORF

AT5G09460

Not tested

ath-MIR2934

TCTTTCTGCAAACGCCTTGGA

SUVH6

AT2G22740

No

ath-MIR2935

TGGAATCACACGGTCGTCATTC

YUC11

AT1G21430

No

ath-MIR2936

CTTGAGAGAGAGAACACAGACG

TIF

AT1G76720

No

ath-MIR2937

ATAAGAGCTGTTGAAGGAGTC

ASML2

AT3G12890

No

ath-MIR2938

GATCTTTTGAGAGGGTTCCAG

HSFA7B

AT3G63350

No

ath-MIR2939

TAACGCACAACACTAAGCCAT

F-Box

AT3G19890

Yes

  1. 7 candidate sequences capable of forming hairpin structures identified by miRCat software. Target sequences are shown, and cleavage was tested for 5 of the 7 sequences using 5' RACE-PCR.