Table 2 Listing of ESTs differentially expressed during desiccation of Plectus murrayi and their homologs in GenBank.
From: Desiccation survival in an Antarctic nematode: molecular analysis using expressed sequenced tags
Clone ID | GenBank accession number | Homolog accession | Annotation (Organism) number | E-value | Percentage similarity |
|---|---|---|---|---|---|
Metabolism É (22) | |||||
SH_Pa.AA.01 | FK670236 | ref|NP_496237.1| | GPD family member [Caenorhabditis elegans] | 1e-40 | 86% |
SH_Pa.AB.02 | FK670237 | ref|NP_498081.2| | ALDH family member [C. elegans] | 2e-80 | 74% |
SH_Pa.AF.06 | FK670241 | gb|AAF81283.1| | Glutathione S-transferase [Haemonchus contortus] | 3e-51 | 49% |
SH_Pa.AH.08 | FK670243 | ref|NP_496161.1| | Lipid Transfer protein family member [C. elegans] | 6e-42 | 72% |
SH_Pa.AI.09 | FK670244 | gb|AAC47996.1| | Aspartyl protease protein 6 [C. elegans] | 2e-51 | 53% |
SH_Pa.EA.014 | FK670249 | WBGene00002263 | Plant LEA related family member [C. elegans] | 1e-33 | 28% |
SH_Pa.FA.015 | FK670250 | gb|EDP32297.1| | TPS6 protein 1 [Brugia malayi] | 1e-55 | 51% |
SH_Pa.IA.018 | FK670253 | gb|EDP36623.1| | FBA1, putative [B. malayi] | 1e-73 | 84% |
SH_Pa.BD.021 | FK670254 | gb|AAC97508.1| | Thymidylate synthase [C. elegans] | 1e-28 | 62% |
SH_PA_Ssh.056 | FK670287 | WBGene00006975 | Zinc finger protein family member [C. elegans] | 2e-28 | 53% |
SH_Pa.BH.025 | FK670258 | ref|NP_494721.1| | Probable glycerol kinase [C. elegans] | 4e-62 | 71% |
SH_Pa.BI.026 | FK670259 | ref|NP_001006395.1| | MDH1, NAD (soluble) [Gallus gallus] | 1e-71 | 68% |
SH_Pa.CC.027 | FK670260 | ref|ZP_00056387.1| | IDH [Magnetospirillum magnetotacticum] | 4e-86 | 73% |
PA_Sh_Ab.062 | FK670293 | ref|NP_498111.2| | ATP synthase subunit family member [C. elegans] | 8e-110 | 93% |
SH_Pa.CD.019 | FK670261 | gb|EDP37408.1| | NADH-ubiquinone oxidoreductase [B. malayi] | 2e-57 | 60% |
SH_Pa.CH.031 | FK670264 | ref|NP_496736.1| | Glycogen synthase family member [C. elegans] | 1e-35 | 50% |
SH_Pa.CI.032 | FK670265 | emb|CAA53718.1| | ADP/ATP translocase [C. elegans] | 6e-93 | 90% |
SH_Pa.DG.038 | FK670269 | ref|NP_503306.1| | Bi-functional glyoxylate cycle protein [C. elegans] | 4e-95 | 90% |
SH_Pa.DH.039 | FK670270 | gb|AAC19750.1| | Putative glutamate dehydrogenase [H. contortus] | 9e-111 | 88% |
SH_Pa.DH.030 | FK670263 | gb|AAC97508.1| | Thymidylate synthase [C. elegans] | 1e-26 | 49% |
SH_Pa.AA.036 | FK670268 | WBGene00009165 | Glutathione peroxidase [C. elegans] | 3e-63 | 79% |
PA_Sh_bb.067 | FK670298 | ref|NP_498111.2| | ATP synthase sub unit family member [C. elegans] | 8e-110 | 93% |
Environmental information processing (15) | |||||
SH_Pa.AC.03 | FK670238 | gb|AAM55195.1| | Cathepsin L cysteine protease [H. contortus] | 2e-81 | 77% |
SH_Pa.AD.04 | FK670239 | ref|NP_508913.1| | JNK kinase family member jkk-1 [C. elegans] | 2e-06 | 41% |
SH_Pa.AE.05 | FK670240 | WBGene00004930 | Superoxide dismutase family member [C.elegans] | 4e-80 | 81% |
SH_Pa.AG.07 | FK670242 | gb|ABA41369.1| | Type II antifreeze protein [Clupea harengus] | 2e-35 | 69% |
SH_Pa.AA.010 | FK670245 | gb|AAN78300.1| | Heat shock protein 70 A [Heterodera glycines] | 2e-59 | 89% |
SH_Pa.DA.013 | FK670248 | ref|NP_495536.1| | Small heat shock protein family member [C. elegans] | 2e-115 | 90% |
SH_Pa.GA.016 | FK670251 | ref|NP_496549.1| | RAB family member [C. elegans] | 7e-103 | 88% |
SH_Pa.HA.017 | FK670252 | gb|EDP28446.1| | Ras-related protein Rab-11B, putative [B. malayi] | 1e-53 | 77% |
SH_Pa.BF.023 | FK670256 | ref|NP_509019.1| | Heat shock protein family member [C. elegans] | 8e-78 | 91% |
SH_Pa.BG.024 | FK670257 | gb|AAD00182.1| | Inhibitor of apoptosis homolog [C. elegans] | 5e-53 | 52% |
SH_Pa.CF.029 | FK670262 | gb|EDP35652.1| | Heat shock protein 90 protein [B. malayi] | 8e-59 | 53% |
SH_Pa.DD.034 | FK670266 | ref|NP_499889.2| | DumPY: shorter than wild-type [C.elegans] | 7e-47 | 63% |
PA_Sh_Ab.063 | FK670294 | gb|AAO44907.1| | Collagen protein 170 [C. elegans] | 4e-30 | 62% |
PA_Sh_Ib.070 | FK670300 | gb|EDP30373.1| | Leucine rich repeat family protein [B. malayi] | 3e-27 | 40% |
PA_Sh_bB.072 | FK670302 | gb|EDP31428.1| | Laminin receptor 1 [Xenopus laevis] | 1e-73 | 71% |
Genetic information processing (23) | |||||
SH_Pa.BA.011 | FK670246 | gb|AAG50205.1| | AP inhibitor [Parelaphostrongylus tenuis] | 7e-41 | 62% |
SH_Pa.CA.012 | FK670247 | emb|CAJ57642.1| | Putative E2 enzyme [Oesophagostomum dentatum] | 2e-74 | 97% |
SH_Pa.DE.035 | FK670267 | gb|EDP39185.1| | Histone H2B 2, putative [B. malayi] | 3e-33 | 94% |
PA_Sh_Cb.064 | FK670295 | gb|AAT28331.1| | Peroxiredoxin [H. contortus] | 5e-89 | 83% |
PA_Sh_bH.078 | FK670308 | ref|NP_956267.1| | Ubiquitin specific protease 14 [D. rerio] | 5e-40 | 44% |
SH_Pa.DI.040 | FK670271 | ref|NP_491416.1| | Ribosomal protein, LSU family member [C. elegans] | 7e-104 | 85% |
SH_Pa.EE.041 | FK670272 | ref|NP_502794.1| | Ribosomal protein, SSU family member [C. elegans] | 8e-73 | 94% |
SH_Pa.EF.042 | FK670273 | ref|NP_502794.1| | Ribosomal protein, SSU family member [C. elegans] | 3e-67 | 81% |
SH_Pa.EG.043 | FK670274 | ref|NP_501167.1| | Ribosomal protein, SSU family member [C. elegans] | 9e-85 | 84% |
PA_Sh_EH.044 | FK670275 | ref|NP_741371.2| | Ribosomal protein, LSU family member [C. elegans] | 5e-57 | 77% |
PA_Sh_EI.045 | FK670276 | ref|NP_498660.1| | Ribosomal protein, LSU family member [C. elegans] | 1e-67 | 88% |
PA_Sh_Ab.046 | FK670277 | ref|NP_740944.1| | Ribosomal protein, SSU family member [C. elegans] | 2e-40 | 82% |
PA_Sh_Bb.047 | FK670278 | ref|NP_496375.1| | Ribosomal protein, LSU family member [C. elegans] | 9e-51 | 97% |
PA_Sh_Cb.048 | FK670279 | gb|EDP38710.1| | 60S ribosomal protein L27a, putative [B. malayi] | 5e-54 | 83% |
PA_Sh_Db.049 | FK670280 | gb|EDP38220.1| | 60S ribosomal protein L39, putative [B. malayi] | 9e-21 | 94% |
PA_Sh_Lb.057 | FK670288 | gb|EDP29175.1| | 40S ribosomal protein S6, putative [B. malayi] | 1e-25 | 86% |
PA_Sh_Eb.050 | FK670281 | ref|NP_492457.1| | EF family member [C. elegans] | 2e-66 | 89% |
PA_Sh_Fb.051 | FK670282 | gb|EDP34276.1| | EF1-alpha, putative [B. malayi] | 1e-117 | 88% |
PA_Sh_Gb.052 | FK670283 | ref|NP_492457.1| | EF family member [C. elegans] | 2e-66 | 89% |
PA_Sh_Hb.053 | FK670284 | ref|NP_524808.2| | EF1 beta, isoform A [Drosophila melanogaster] | 5e-45 | 68% |
PA_Sh_Ib.054 | FK670285 | ref|NP_498520.1| | EF family member [C. elegans] | 4e-100 | 89% |
SH_Pa.BE.022 | FK670255 | WBGene00003623 | NHR family member [C. elegans] | 2e-06 | 38% |
PA_Sh_Mb.058 | FK670289 | gb|EDP33960.1| | Transcription factor, putative [B. malayi] | 9e-16 | 87% |
Hypothetical proteins (3) | |||||
PA_Sh_Jb.055 | FK670286 | ref|XP_001666153.1| | Hypothetical protein [C. briggsae] | 4e-41 | 78% |
PA_Sh_Ob.060 | FK670291 | ref|XP_001676045.1| | Hypothetical protein [C. briggsae] | 3e-32 | 55% |
PA_Sh_bC.073 | FK670303 | ref|XP_001631386.1| | Predicted protein [X. laevis] | 2e-34 | 42% |
Novel proteins (17) | |||||
PA_Sh_Nb.059 | FK670290 | n.a | Novel | n.a. | Â |
PA_Sh_Pb.061 | FK670292 | n.a | Novel | n.a. | Â |
PA_Sh_Db.065 | FK670296 | n.a | Novel | n.a. | Â |
PA_Sh_Eb.066 | FK670297 | n.a | Novel | n.a. | Â |
PA_Sh_Gb.068 | FK670299 | n.a | Novel | n.a. | Â |
PA_Sh_bA.071 | FK670301 | n.a | Novel | n.a. | Â |
PA_Sh_bD.074 | FK670304 | n.a | Novel | n.a. | Â |
PA_Sh_bE.075 | FK670305 | n.a | Novel | n.a. | Â |
PA_Sh_bF.076 | FK670306 | n.a | Novel | n.a. | Â |
PA_Sh_bG.077 | FK670307 | n.a | Novel | n.a. | Â |
PA_Sh_bI.079 | FK670309 | n.a | Novel | n.a. | Â |
PA_Sh_bA.080 | FK670310 | n.a | Novel | n.a. | Â |
PA_Sh_bC.028 | FK670311 | n.a | Novel | n.a. | Â |
PA_Sh_bD.020 | FK670312 | n.a | Novel | n.a. | Â |
PA_Sh_bF.033 | FK670313 | n.a | Novel | n.a. | Â |
PA_Sh_bG.037 | FK670314 | n.a | Novel | n.a. | Â |
PA_Sh_bG.069 | FK670315 | n.a | Novel | n.a. | Â |