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Table 1 Validation of DHSs by real-time PCR

From: Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites

DHS category

DHSs tested

ΔCp > 2.0

Fraction

A

13

10

76.9%

B

11

10

90.9%

AB

14

12

85.7%

  1. DHSs were regarded as true positives when the corresponding real-time PCR assay ΔCp was larger than 2 [3, 4]. DHS category denotes DHSs that were present only in samples digested with (A) 240 U/ml or (B) 480 U/ml DNase I, or present in both samples (AB).
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BMC Genomics

ISSN: 1471-2164

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