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Table 1 Gene expression datasets used in this global analysis

From: Global gene expression analysis reveals reduced abundance of putative microRNA targets in human prostate tumours

     

Number of samples

Cancer

Type

Dataset

Refs.

Array type

Probe

sets

Benign

Localised

Metastatic

Prostate cancer

1

[15]

Affy†

37690

58

66

25

 

2

[16]

cDNA

26260

41

61

9

 

3

[17]

cDNA

9984

19

14

20

 

Correlation analysis

[19]

Affy†

22277

10

10

 
 

AD and AI analysis

[21]

cDNA

13314

3

17 AD/8 AI

 

Breast cancer

4

[33]

Affy†

47000

7

40

 

Lung adeno-carcinoma

5

[34]

Affy†

7129

10

86

 

Acute myeloid leukaemia

6

[35]

cDNA

21370

6‡

23§

 

Liver

cancer

7

[36]

cDNA

23075

76

104

 
  1. †: Affymetrix oligo nucleotide microarray. ‡: Normal Bone Marrow. §: Acute Myeloid Leukaemia. Correlation analysis: The dataset used in the correlation analysis between the transcript levels of individual miRNAs and those of their putative targets. AD and AI analysis: The dataset used in the analysis of the transcript levels of miRNA targets in androgen-dependent and androgen-independent prostate cancer.