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Table 2 Examples of lineage-unique LSE families in representative Vibrionaceae genomes. The number in parenthesis shows the number of lineage-unique LSE families in each genome

From: Genomic and systems evolution in Vibrionaceae species

Strain Function description No. genes in families
V. cholerae O395 (49) DNA circulation protein 2
  DNA transposition protein 2
  Tail tube protein 2
  Phage virion morphogenesis protein 2
  gp27/gp16/gp05 6
V. parahaemolyticus RIMD 2210633 (24) Type 1 pili subunit CsuA/B protein 2
  Dienelactone hydrolase domain protein 2
  Site-specific recombinase 2
V. vulnificus CMCP6 (16) Permease of the major facilitator superfamily 2
  Transposase 2
  Cation transport ATPase 2
  Cobalamin biosynthesis protein CobW 2
V. vulnificus YJ016 (11) 4-hydroxyphenylacetate degradation bifunctionalisomerase 2
  CRISPR-associated protein 4
V. splendidus LGP32 (13) Transposase of insertion sequence ISVisp4 18
  Protein sufB 2
  Sensory box histidine kinase/response regulator 2
A. fischeri MJ11 (10) Response regulator receiver protein 2
  Acetyltransferase 3
A. fischeri ES114 (3) Anaerobic glycerol-3-phosphate dehydrogenase subunit C (RebB) 9
A. salmonicida LFI1238 (12) DNA-binding protein HU-alpha 2
  Phage replication repressor RstR 2
  Shufflon-specific DNA recombinase 2
  Transposase of insertion sequence families 102
P. profundum SS9 (90) Selenoprotein A of glycine-reductase 2
  NosR, Regulator of nitric oxide reductase transcription 2
  Acetolactate synthase, iolD 2
  Myo-inositol catabolismprotein iolB 2
  Anaerobic dicarboxylate transporter 2
  Alpha-galactosidase (melibiase) 2
  Protease/scaffold protein 2
  Sodium: dicarboxylate symporter 3
  Methyl-accepting chemotaxis protein 3
  Reverse transcriptase/maturase family protein 3
  Helix-turn-helix XRE-family like proteins 8
  Transposase 36