Figure 3

simMC (≥ 8 kbp): semi-supervised setting. OFDEG+GC and tetranucleotide frequency (TF) comparison using semi-supervised methods, for the Phrap (A) and Arachne (B) assemblers. As anticipated, the addition of known seeds improves the accuracy of binning using OFDEG in a purely unsupervised manner. However, we note that at higher values of CP the classificaiton performance will degrade due to an increasing number of incorrect assignments made on ambiguous fragments.