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Table 1 OFDEG values for genomes sourced from NCBI.

From: The oligonucleotide frequency derived error gradient and its application to the binning of metagenome fragments

Organism 100 bp 200 bp 40,000 bp
Acinetobacter sp. ADP1 -0.09469 ± 0.0057 -0.07171 ± 0.0053 -0.03765 ± 0.0010
Bacillus anthracis Ames 0581 -0.09552 ± 0.0058 -0.07474 ± 0.0067 -0.04156 ± 0.0014
Prochlorococcus marinus MIT 9211 -0.09507 ± 0.0049 -0.07274 ± 0.0042 -0.04361 ± 0.0045
Streptococcus pneumoniae R6 -0.09439 ± 0.0048 -0.07250 ± 0.0045 -0.03773 ± 0.0010
Shigella flexneri 2a str. 2457T -0.09326 ± 0.0044 -0.07058 ± 0.0030 -0.03486 ± 0.0005
Escherichia coli str. K12 substr. W3110 -0.09310 ± 0.0039 -0.07054 ± 0.0046 -0.03498 ± 0.0006
Thermoplasma volcanium GSS1 -0.09296 ± 0.0047 -0.07194 ± 0.0050 -0.03639 ± 0.0010
Pseudomonas aeruginosa PA7 -0.09655 ± 0.0067 -0.07664 ± 0.0064 -0.04511 ± 0.0045
Xylella fastidiosa M23 -0.09410 ± 0.0049 -0.07097 ± 0.0036 -0.03572 ± 0.0014
Maricaulis maris MCS10 -0.09540 ± 0.0057 -0.07297 ± 0.0043 -0.04096 ± 0.0019
  1. Computed OFDEG values using 5-mer oligos for 10 microbial genomes selected arbitrarily from NCBI. The values listed here represent the sample mean plus or minus the sample standard deviation, averaged over 100 sampling sites over the entire length of the genome. The differences reflect the strength of the signal in relation to sequence length.