Anomaly detection in gene expression via stochastic models of gene regulatory networks

BMC Genomics

Table 3 Steady-state probability of the 13 genes in cell cycle GRNs

State	Cells	CLN3	WHI5	SWI4	MBP1	CLB2	YOX1	YHP1	HCM1	FKH2	NDD1	SWI5	ACE2	SIC1
S1	WT	0.880	0.813	0.829	0.839	0.784	0.99	0.803	0.843	0.855	0.836	0.799	0.99	0.99
	CM	0.878	0.814	0.818	0.848	0.770	0.99	0.802	0.842	0.864	0.839	0.787	0.99	0.99
	C/W	0.998	1.001	0.987	1.011	0.981	1.00	0.999	0.999	1.011	1.004	0.986	1.00	1.00
S2	WT	0.882	0.845	0.845	0.840	0.847	0.99	0.850	0.870	0.863	0.863	0.825	0.99	0.99
	CM	0.876	0.837	0.846	0.847	0.769	0.99	0.853	0.873	0.865	0.861	0.807	0.99	0.99
	C/W	0.994	0.990	1.000	1.008	0.909	1.00	1.004	1.004	1.002	0.998	0.978	1.00	1.00
S3	WT	0.890	0.840	0.826	0.846	0.886	0.99	0.844	0.855	0.863	0.854	0.871	0.99	0.99
	CM	0.880	0.846	0.820	0.849	0.751	0.99	0.863	0.863	0.869	0.870	0.840	0.99	0.99
	C/W	0.989	1.008	0.993	1.003	0.847	1.00	1.022	1.010	1.007	1.019	0.964	1.00	1.00
S4	WT	0.890	0.841	0.837	0.845	0.866	0.99	0.839	0.870	0.862	0.853	0.857	0.99	0.99
	CM	0.879	0.835	0.821	0.849	0.757	0.99	0.864	0.864	0.859	0.863	0.845	0.99	0.99
	C/W	0.988	0.993	0.982	1.005	0.874	1.00	1.029	0.994	0.996	1.012	0.986	1.00	1.00
S5	WT	0.891	0.850	0.837	0.846	0.877	0.99	0.839	0.869	0.862	0.856	0.865	0.99	0.99
	CM	0.869	0.830	0.823	0.842	0.756	0.99	0.862	0.862	0.857	0.861	0.845	0.99	0.99
	C/W	0.976	0.977	0.983	0.995	0.862	1.00	1.027	0.991	0.994	1.006	0.976	1.00	1.00

ISSN: 1471-2164