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Figure 3 | BMC Genomics

Figure 3

From: Intensity-based analysis of dual-color gene expression data as an alternative to ratio-based analysis to enhance reproducibility

Figure 3

Ratio- and intensity-based analysis results in similar sets of differentially expressed genes. For the cell line dataset C1, p-values generated by the ratio and intensity ANOVA models were ranked from low to high, and assigned to bins containing 1000 genes. The fraction of overlap represents the proportion of genes occurring in both sets.

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