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Table 3 Splice site strength for prevalent and non-prevalent splice forms.

From: Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii

AS event non-prevalent vs prevalent prevalent vs constitutive
  non-prevalent avg. score p -value prevalent avg. score prevalent avg. score p -value constitutive avg. score
Alt5' 5.88 1.98e-07 8.14 7.51 1.67e-07 8.85
Alt3' 4.17 2.30e-12 6.73 6.31 6.95e-18 7.57
  1. Splice site scores and p-values for the 5' and 3' sites of prevalent and non-prevalent splice forms. The table shows data that support two hypotheses: (i) non-prevalent splice sites are weaker than splice sites associated with the prevalent splice form; (ii) prevalent splice sites are weaker than splice sites associated with constitutive splicing. The "avg. score" columns provide the average score of splice site occurrences. For the comparison of non-prevalent with prevalent splice forms, the scores are computed with respect to a motif model of prevalent instances; for the comparison of prevalent and constitutive splicing the scores are computed with respect to a model of the constitutive splice sites.