Table 1 Statistical summary of the genomic sequences of four Oryza species used in this study.
From: Massive gene losses in Asian cultivated rice unveiled by comparative genome analysis
| Â | Oj | On | Or | Og |
|---|---|---|---|---|
Genome size (Mbp) | 382 | 448 | 439 | 354 |
No. of BESs | - | 106,124 | 70,982 | 66,821 |
Total length (bp) | 382,150,945 | 69,913,922 | 49,984,295 | 37,764,022 |
Total length of repetitive sequences (bp) | 148,769,283 | 27,735,588 | 19,535,869 | 11,691,571 |
Fraction of repetitive sequences (%) | 38.9 | 39.7 | 39.1 | 31.0 |
No. of BESs used for mapping | - | 76,114 | 51,863 | 54,008 |
No. of mapped BESs | - | 67,813 | 46,959 | 46,836 |
No. of ambiguous BESs | - | 4,309 | 2,848 | 3,563 |
No. of unmapped BESs | - | 3,992 | 2,056 | 3,609 |
Fraction of unmapped BESs (%) | - | 5.2 | 4.0 | 6.7 |