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Table 2 Markers representing cases where the willow sequence shows best sequence homology to the expected location in the poplar genome (paralog 1), but with a different position in the willow map than the expected, possibly representing translocations of small chromosomal segments between the genomes.

From: High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus

Marker

Poplar paralog 1*

Poplar paralog 2**

Willow ***

Willow LG

XI-5

XI

NA

XI:14789231- 14789785

Ib

XIII-9_sa

XIII:8154297- 8159215

No hit

XIII:8156663- 8157295

Ib

XIV_20_sa

XIV:13995907- 14001590

No hit

XIV:13996955- 13997593

II

XVIII_3_sa

XVIII:2310344- 2313479

No hit

XVIII:2312570- 2312814

VI

III_23_sa_pI+pIII

III:8892578- 8897817

No hit

III:8892660- 8893230

VII

II_37_sa_pI

II:20797060- 20804409

IV:7209830- 7217966

II:20803016- 20803505

XVII

II-23_sa

II:21561743- 21565690

No hit

II:21562039- 21562808

XVII

  1. * Genomic region in poplar where primers were designed
  2. ** The second best BLAST hit with paralog 1
  3. *** Best BLAST hit with the willow sequence
  4. NA = no alignment available since the markers were developed by Hanley et al. (2006)