| Pb01 | Pb03 | Pb18 | Total |
---|
Classified
b
| 102 (26.6%) | 177 (37.3%) | 185 (39.1%) | 464 (34.8%) |
Not classified
c
| 282 (73.4%) | 298 (62.7%) | 288 (60.9%) | 868 (65.2%) |
Total
| 384 (100%) | 475 (100%) | 473 (100%) | 1332 (100%) |
- aDNA transposase sequences from the P. brasiliensis transcriptome were used to perform queries in a modified BLASTN search (see Methods) in the genome of isolates Pb01, Pb03 and Pb18 and combined with a strategy for identification of TIRs.
- bElements assigned to a DNA transposon superfamily according to the standard principles of the TE classification proposed by Wicker et al. [20].
- cSequences that do not meet all the criteria proposed by Wicker et al. [20]. They are highly defective elements, with lower conservation of the typical transposase domains (HTH, CENPB and/or DDE).