|
Grass carp linkage map
|
Zebra fish genome map
|
|---|
|
LG
|
Length of LG (cM)
|
No. of loci
|
ALD (cM)
|
Homologous chromosome1
|
No. of syntenic loci2
|
Length of syntenic region (Mb)
|
Syntenic ALD (Mb)
|
R
|
|---|
|
1
|
95.2
|
18
|
5.3
|
7
|
11
|
54.6
|
5.0
|
78%
|
|
2
|
69.9
|
19
|
3.7
|
3
|
7
|
38.1
|
5.4
|
60%
|
|
3
|
68.5
|
10
|
6.9
|
21
|
3
|
39.6
|
13.2
|
86%
|
|
4
|
61.3
|
16
|
3.8
|
19
|
8
|
42.0
|
5.3
|
91%
|
|
5
|
57.0
|
15
|
3.8
|
13
|
8
|
39.0
|
4.9
|
72%
|
|
6
|
56.9
|
11
|
5.2
|
23
|
4
|
36.4
|
9.1
|
79%
|
|
7
|
56.1
|
13
|
4.3
|
18
|
9
|
38.2
|
4.2
|
78%
|
|
8
|
55.4
|
13
|
4.3
|
1
|
7
|
35.3
|
5.0
|
63%
|
|
9
|
55.2
|
15
|
3.7
|
12
|
3
|
24.9
|
8.3
|
52%
|
|
10
|
54.1
|
9
|
6.0
|
11
|
2
|
41.6
|
20.8
|
92%
|
|
11
|
53.7
|
10
|
5.4
|
4
|
5
|
31.4
|
6.3
|
73%
|
|
12
|
50.9
|
12
|
4.2
|
16
|
8
|
37.8
|
4.7
|
71%
|
|
13
|
50.8
|
10
|
5.1
|
14
|
3
|
15.7
|
5.2
|
28%
|
|
14
|
47.3
|
10
|
4.7
|
20
|
7
|
51.6
|
7.4
|
91%
|
|
15
|
43.3
|
11
|
3.9
|
15
|
8
|
44.3
|
5.5
|
94%
|
|
16
|
41.9
|
10
|
4.2
|
9
|
4
|
34.4
|
8.6
|
67%
|
|
17
|
40.6
|
17
|
2.4
|
5
|
8
|
53.6
|
6.7
|
77%
|
|
18
|
39.1
|
18
|
2.2
|
6
|
9
|
55.7
|
6.2
|
94%
|
|
19
|
38.9
|
10
|
3.9
|
24
|
5
|
23.6
|
4.7
|
59%
|
|
20
|
34.3
|
4
|
8.6
|
25
|
2
|
11.9
|
6.0
|
36%
|
|
21
|
29.6
|
7
|
4.2
|
8
|
6
|
30.4
|
5.1
|
54%
|
|
22
|
28.7
|
6
|
7.8
|
2
|
2
|
3.4
|
1.7
|
6%
|
|
23
|
24.0
|
5
|
4.8
|
17
|
4
|
22.8
|
5.7
|
44%
|
|
24
|
23.4
|
10
|
2.3
|
10
|
3
|
2.1
|
0.7
|
5%
|
|
24
|
23.4
|
10
|
2.3
|
22
|
2
|
1.1
|
0.6
|
3%
|
|
Total
|
1176.1
|
279
|
--
|
--
|
138
|
809.5
|
--
|
63%
|
|
Average (± SD)
|
49.0 (± 16.2)
|
11.6 (± 4.1)
|
4.2 (± 1.6)
|
--
|
5.5 (± 2.7)
|
32.4 (± 14.6)
|
6.3 (± 4.0)
|
--
|
- ALD, average inter-locus distance; '1' the homologous zebrafish chromosome that share at least two markers in common with a given grass carp linkage group; '2', the number of syntenic loci in one pair of grass carp LG and homologous zebrafish chromosome; R, the ratio of syntenic region to displayed region of reference chromosome (Mb) in NIH genetic sequence database http://blast.ncbi.nlm.nih.gov/Blast.cgi; Length of syntenic region (Mb) was calculated based on the distance between the longest syntenic pair of loci in each homologous zebrafish chromosome.
