Table 2 Summary of the sex-averaged linkage map of grass carp and the homologous zebrafish chromosomes that share at least two markers in common
Grass carp linkage map | Zebra fish genome map | |||||||
|---|---|---|---|---|---|---|---|---|
LG | Length of LG (cM) | No. of loci | ALD (cM) | Homologous chromosome1 | No. of syntenic loci2 | Length of syntenic region (Mb) | Syntenic ALD (Mb) | R |
1 | 95.2 | 18 | 5.3 | 7 | 11 | 54.6 | 5.0 | 78% |
2 | 69.9 | 19 | 3.7 | 3 | 7 | 38.1 | 5.4 | 60% |
3 | 68.5 | 10 | 6.9 | 21 | 3 | 39.6 | 13.2 | 86% |
4 | 61.3 | 16 | 3.8 | 19 | 8 | 42.0 | 5.3 | 91% |
5 | 57.0 | 15 | 3.8 | 13 | 8 | 39.0 | 4.9 | 72% |
6 | 56.9 | 11 | 5.2 | 23 | 4 | 36.4 | 9.1 | 79% |
7 | 56.1 | 13 | 4.3 | 18 | 9 | 38.2 | 4.2 | 78% |
8 | 55.4 | 13 | 4.3 | 1 | 7 | 35.3 | 5.0 | 63% |
9 | 55.2 | 15 | 3.7 | 12 | 3 | 24.9 | 8.3 | 52% |
10 | 54.1 | 9 | 6.0 | 11 | 2 | 41.6 | 20.8 | 92% |
11 | 53.7 | 10 | 5.4 | 4 | 5 | 31.4 | 6.3 | 73% |
12 | 50.9 | 12 | 4.2 | 16 | 8 | 37.8 | 4.7 | 71% |
13 | 50.8 | 10 | 5.1 | 14 | 3 | 15.7 | 5.2 | 28% |
14 | 47.3 | 10 | 4.7 | 20 | 7 | 51.6 | 7.4 | 91% |
15 | 43.3 | 11 | 3.9 | 15 | 8 | 44.3 | 5.5 | 94% |
16 | 41.9 | 10 | 4.2 | 9 | 4 | 34.4 | 8.6 | 67% |
17 | 40.6 | 17 | 2.4 | 5 | 8 | 53.6 | 6.7 | 77% |
18 | 39.1 | 18 | 2.2 | 6 | 9 | 55.7 | 6.2 | 94% |
19 | 38.9 | 10 | 3.9 | 24 | 5 | 23.6 | 4.7 | 59% |
20 | 34.3 | 4 | 8.6 | 25 | 2 | 11.9 | 6.0 | 36% |
21 | 29.6 | 7 | 4.2 | 8 | 6 | 30.4 | 5.1 | 54% |
22 | 28.7 | 6 | 7.8 | 2 | 2 | 3.4 | 1.7 | 6% |
23 | 24.0 | 5 | 4.8 | 17 | 4 | 22.8 | 5.7 | 44% |
24 | 23.4 | 10 | 2.3 | 10 | 3 | 2.1 | 0.7 | 5% |
24 | 23.4 | 10 | 2.3 | 22 | 2 | 1.1 | 0.6 | 3% |
Total | 1176.1 | 279 | -- | -- | 138 | 809.5 | -- | 63% |
Average (± SD) | 49.0 (± 16.2) | 11.6 (± 4.1) | 4.2 (± 1.6) | -- | 5.5 (± 2.7) | 32.4 (± 14.6) | 6.3 (± 4.0) | -- |