Table 1 List of all sequence polymorphisms located on the Tortula ruralis chloroplast genome sequence.
position | location | state | strand | codon |
|---|---|---|---|---|
7810 | petD intron | Y (C/T) | - | Â |
7821 | petD intron | M (A/C) | - | Â |
8076 | petD intron | M (A/C) | - | Â |
9525 | petB intron | Y (C/T) | - | Â |
19020 | psbJ/petA IGR | K (G/T) | na | Â |
23480 | psaI/ycf4 IGR | K (G/T) | na | Â |
23623 | psaI/ycf4 IGR | K (G/T) | na | Â |
29394 | trnM/trnV IGR | M (A/C) | na | Â |
41006 | psaB/rps14 IGR | R (A/G) | na | Â |
45811 | trnT/trnE IGR | W (A/T) | na | Â |
47128 | ycf2 | R (A/G) | - | GTA or GTG - synonymous |
47698 | ycf2 | M (A/C) | - | TTA or TTC - nonsynonymous |
49026 | ycf2 | K (G/T) | - | GTA or TTA - nonsynonymous |
49946 | ycf2 | K (G/T) | - | AGT or ATT - nonsynonymous |
50907 | ycf2 | R (A/G) | - | TAA or TAG - synonymous |
53115 | trnH/psbA IGR | R (A/G) | na | Â |
55502 | matK | K (G/T) | - | TTG or TTT - nonsynonymous |
56736 | trnK intron | Y (C/T) | - | Â |
65765 | atpI/atpH IGR | K (G/T) | na | Â |
67161 | rps12 | R (A/G) | - | CGA or CGG - synonymous |
72206 | rpoC1-exon2 | K (G/T) | - | TGT or TTT - nonsynonymous |
75462 | rpoB | Y (C/T) | - | CGC or CGT - synonymous |
81152 | ndhB intron | R (A/G) | - | Â |
82247 | ndhB exon1 | Y (C/T) | - | CCA or TCA nonsynonymous |
82463 | rps7/ndhB IGR | W (A/T) | na | Â |
83334 | rps12 exon2/rps7 IGR | W (A/T) | na | Â |
84909 | Noncoding IR | K (G/T) | na | Â |
105822 | ndhG | M (A/C) | + | GTA or GTC - synonymous |
121800 | Noncoding IR | M (A/C) | na | Â |