Figure 5

SRO Orthologs in Sequenced Plant Genomes. All SRO sequences used for analyses are listed with names according to the proposed nomenclature and their original identifiers. The length of the proteins in amino acids (AAs; size) and the presence (+) or absence (-) of potential conserved domains (WWE PS50918, PARP PS51059, RST PF12174) are indicated. Proteins predicted to lack domains because they are not full length are indicated (#). Domains present but with low statistical support are indicated with (‡). Data source: NCBI (National Center for Bioinformatics, http://www.ncbi.nlm.nih.gov/). Additional web resources are listed below: PZ, Phytozome http://www.phytozome.net/; TAIR, the Arabidopsis Information Resource http://www.arabidopsis.org/; JGI, Joint Genome Initiative (Poplar: http://genome.jgi-psf.org/Poptr1_1/Poptr1_1.home.html; Physcomitrella: http://genome.jgi-psf.org/Phypa1_1/Phypa1_1.home.html; Selaginella: http://genome.jgi-psf.org/Selmo1/Selmo1.home.html); CVI, Craig Venter Insititute http://castorbean.jcvi.org/; BDB, Brachypodium database http://www.brachypodium.org/; RGADB, Rice Genome Annotation database http://rice.plantbiology.msu.edu/. Two SROs from Brachypodium, Bradi2g10720.1 and Bradi1g01340.1, were only present as very short and incomplete predictions, and thus could not be assigned to any group.