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Table 1 Drosophila genes co-upregulated in S2 cells either infected with FHV or expressing an RNA1 replicon.

From: Complementary transcriptomic, lipidomic, and targeted functional genetic analyses in cultured Drosophila cells highlight the role of glycerophospholipid metabolism in Flock House virus RNA replication

Biological Process

Gene Symbol

Gene Name

Carbohydrate metabolism

cenB1A

Centaurin β1A

 

CG12582

-

Heme metabolism

Alas

Aminolevulinate synthase

 

l(3)02640

Lethal (3) 02649

Lipid metabolism

Cct1

CTP:phosphocholine cytidylyltransferase 1

 

Cct2

CTP:phosphocholine cytidylyltransferase 2

 

CG3902

-

 

Lip4

Lipase 4

Protein metabolism

CalpC

Calpain C

 

CG1340

-

 

CG4266

-

 

CG18557

-

 

dream

dream

 

pUf68

Poly U binding factor 68 kDa

 

stv

Starvin

Metabolism, other

CG3168

-

 

CG9886

-

 

CG10137

-

 

CG17807

-

Defense response

cactin

cactin

 

dos

Daughter of sevenless

 

Eip75B

Ecdysone-induced protein 75B

 

PGRP-LA

Peptidoglycan recognition protein LA

 

Rel

Relish

 

Sp7

Serine protease 7

 

Traf-like

TNF-receptor-associated factor-like

Signal transduction

CG6954

-

 

CG11534

-

 

CG12091

-

 

Dgp-1

Dgp-1

 

drongo

drongo

 

Ptp61f

Protein tyrosine phosphatase 61F

 

RhoGAP18B

RhoGAP18B

 

Socs36E

Suppressor of cytokine signalling at 36E

 

sra

Sarah

Transcription

CG16903

-

 

Ets21C

Ets at 21C

 

Nvy

Nervy

 

Rab10

Rab-protein 10

Cytoskeletal organization

Insc

Inscuteable

 

WASp

WASp

Transport

CG4726

-

 

Tamo

tamo

DNA synthesis

DNApol-iota

DNApol-iota

Stress response

Hsp23

Heat shock protein 23

Cell development

Foi

Fear-of-intimacy

Ubiquitin cycle

CG9153

-

Unknown

CG1529

-

 

CG4036

-

 

CG4281

-

 

CG5118

-

 

CG5399

-

 

CG6701

-

 

CG6762

-

 

CG7326

-

 

CG7457

-

 

CG7967

-

 

CG8620

-

 

CG9796

-

 

CG12022

-

 

CG12084

-

 

CG13117

-

 

CG13917

-

 

CG13926

-

 

CG14642

-

 

CG33191

-

 

CG34349

-

 

CG42324

 
 

Cyp6a17

Cyp6a17

 

meso18E

meso18E

 

Msr-110

Msr-110

 

unc-119

unc-119

  1. Biological process designation was determined from either direct GO biological process terms or inferred from GO molecular function terms curated from the Flybase database http://flybase.org/. Complete data for co-upregulated genes, including Flybase ID, CCG number, gene symbol, gene name, GO terms (function, process, and compartment), genetic interaction partners, yeast and human orthologs, and fold change are provided as Additional File 3.