Single feature polymorphism (SFP)-based selective sweep identification and association mapping of growth-related metabolic traits in Arabidopsis thaliana

Table 1 Overview of sweep-candidate regions used for the association analysis

Name	Chr.	Focal position	From	To	Length of avg. haplotype sharing
SR1	1	12,104,888	12,102,020	12,108,376	6,356
SR2	1	23,826,967	23,824,815	23,829,023	4,208
SR3	3	16,905,787	16,905,273	16,906,447	1,174
SR4	3	17,859,222	17,858,441	17,860,021	1,580
SR5	4	198,623	195,197	201,162	5,965

Candidates were called from proportion of high PHS in a sliding window of 2000 SFPs (threshold = 45%). The focal SFP is the highest scoring SFP in the candidate region.

ISSN: 1471-2164