Physical mapping in highly heterozygous genomes: a physical contig map of the Pinot Noir grapevine cultivar

BMC Genomics

Table 2 Status of the grape cv. Pinot Noir physical map assembly.

Number of clones fingerprinted	49,104
Number of clones used for map assembly	38,983
Number of singletons	3,372
Number of contigs	1,804
>200 clones	1
101-200 clones	14
51-100 clones	139
26-50 clones	350
10-25 clones	503
3-9 clones	557
2 clones	240
Unique bands in the contigs	807,776
Total physical length of the contigs (Mb)*	888
Number of Q clones	2,310
Number of Q contigs	662

*Each fingerprinted band was estimated to represent an average of 1.1 kb. The estimate was based on the average insert size of the BAC clones divided by the average number of bands per clone used for contig assembling

ISSN: 1471-2164