Table 1 ZNF genes and transcriptsa in the human 8q24.3 ZNF cluster on contig AF235103 (chr 8:145.893.231 -- 146.238.749)
Gene name (HUGO) | Locationb | Strand | Nucleotide sequencec | RefSeqd | Gene IDe | ENSEMBL transcript ID.f | No of exons | cDNA (bp) | Amino acids (aa) | Remarks |
|---|---|---|---|---|---|---|---|---|---|---|
ZNF251 | 145 917 103 -- 145 951 786 (34 684 bp) | - | AK000435 AK091638 XM_291262 BC006258 | NM_138367 | 90987 | ENST00000 292562 | 5 | 3018 | 671 | KRAB-A KRAB-B |
ZNF34 | 145 968 415 -- 145 983 530 (15 116 bp) | - | AK096508 AL833814 BC028136 BC004480 | NM_030580 | 80778 | ENST00000 343459 | 6 | 2830 | 539 | KRAB-A KRAB-B alias Kox32 |
ZNF517 | 145 995 065 -- 146 006 265 (11 201 bp) | + | AK097278 AK096527 AK131440 XM_291261 AX721108 | NM_213605 | 340385 | ENST00000 359971 | 6 | >2536 | >527 | KRAB-A KRAB-B |
ZNF7 | 146 023 815 -- 146 039 409 (15 595 bp) | + | M29580 AK096025 | NM_003416 | 7553 | ENST00000 325241 | 5 | 2345 | 686 | KRAB-A KRAB-B alias: Kox4 |
ZNF250 | 146 077 336 -- 146 097 650 (20 315 bp) | - | AK054888 BC017091 AK095705 X16282 | NM_021061 NM_001103159 | 58500 | ENST00000 292579 | 6 | 2168 | 560 | KRAB-A KRAB-B alias: ZNF647 |
ZNF 16 | 146 126 577 -- 146 147 078 (20 502 bp) | - | BC010996 AK096815 AF244088 X52340 AL834451 | NM_006958 NM_001029976 | 7564 | ENST00000 276816 | 4 | >2501 | >715 | no KRAB alias: Kox9 |
ZNF252 | 146 169 773 -- 146 191 428 (21 656 bp) 146 169 773 -- 146 199 082 (29 310 bp) | - | BC016287 BC019922 AK128723 BC065734 | NR_023392 | 286101 | ENST00000 355436 | 2 5 | 5731 5428 | 461 461 | KRAB-A not in ZNF ORF; KRAB-B with stop codon after stop in frame more zinc fingers |