From: Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates
Repeat Type | Total Sequence | Total Gaps | Captured Gaps | Uncaptured Gaps |
---|---|---|---|---|
All Repeats | 36.9 (0.4) | 48.9 (1.4) | 45.1 (1.7) | 49.9 (1.7) |
Simple | 1.6 (0.0) | 4.6 (0.7) | 10.3 (1.0) | 2.9 (0.5) |
LTR | 4.7 (0.1) | 5.6 (0.7) | 2.8 (0.5) | 6.4 (0.8) |
SINE | 9.3 (0.2) | 8.8 (0.7) | 9.6 (1.0) | 8.6 (0.5) |
LINE | 18.6 (0.3) | 27.9 (1.3) | 20.6 (1.6) | 29.9 (1.8) |
DNA | 2.7 (0.0) | 2.0 (0.2) | 1.8 (0.4) | 2.1 (0.4) |