Skip to main content
Figure 6 | BMC Genomics

Figure 6

From: Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics

Figure 6

Profile of metabolic pathway annotations for the nrFLcDNAs according to LycoCyc. To obtain LycoCyc annotations for the nrFLcDNAs, similarity between nrFLcDNAs and SGN tomato unigenes was assessed using BLASTN. The top hit SGN tomato unigene to each nrFLcDNA was extracted at a threshold E-value of 1e-180 (gray bars). LycoCyc pathway annotations for the top hit unigenes were then regarded as annotations for nrFLcDNAs. Pathway annotations for all SGN tomato unigenes (black bars) was retrieved from documents of LycoCyc ver 1.0.1.1. Asterisks indicate that the difference in the frequency is statistically significant at 5% level.

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us