Survey of transcripts expressed by the invasive juvenile stage of the liver fluke Fasciola hepatica

BMC Genomics

Table 2 Contigs including more reads in the F. hepatica NEJ ESTs assembly

Contig	Length	Reads	Signal_P*	TMHMM**	Description***	Distribution
						FHE	TRE	CES	TUR	CND	LTZ	ECZ	DTS
FHC00023	824	57	SPep	0	Similar to FHA01510_1	X
FHC00067	483	30	SPep	1	No hit
FHC00049	1130	27	-	0	cathepsin B3	X	X	X	X	X	X	X	X
FHC00068	615	21	-	0	Similar to AT006824 C. sinensis clone	X	x
FHC00138	876	18	-	0	Thioredoxin peroxidise	X	X	X	X	X	X	X	X
FHC00005	792	16	SAnc	3	Similar to AT009818 C. sinensis clone	X	x
FHC00024	1064	14	SPep	0	cathepsin L3	X	X	X	X	X	X	X	X
FHC00014	612	12	SAnc	2	Similar to AT009818 C. sinensis clone	X	x
FHC00006	501	12	SPep	1	Similar to AT009816 C. sinensis clone	X	x
FHC00095	699	11	-	0	Similar to FhAE00302	X
FHC00061	819	10	SAnc	3	Similar to AT008757 C. sinensis clone	X	x
FHC00091	443	10	-	0	cysteine-rich intestinal protein	X	x	x	x	x	x	x	x
FHC00340	362	9	-	0	Similar to FHA01532_1	X
FHC00174	413	9	-	0	Similar to OvAE2228 O. viverrini		X	x	x	x	x
FHC00054	610	8	-	0	pro-cathepsin B1	X	X	X	X	X	X	X	X
FHC00376	473	8	SAnc	1	FN5 protein	X	x	x	x		x		x
FHC00101	564	7	-	0	Peptidyl-prolyl cis-trans isomerase	X	X	X	X	X	X	X	X
FHC00017	1131	7	SPep	0	pro-cathepsin B2	X	X	X	X	X	X	X	X
FHC00175	930	7	-	0	Ribosomal protein S2	X	X	X	X	X	X	X	X
FHC00013	252	7	-	0	Ribosomal protein S29	X	x	x	x	x	x	x	x
FHC00187	282	7	-	0	Calcium-binding protein	X	x	x	x	x	x
FHC00030	680	6	SPep	0	Cellular nucleic acid-binding protein	X	x	x	x	x	x	x	x
FHC00018	289	6	-	0	Similar to FhAE00481	X	x
FHC00038	416	6	SAnc	1	no hit
FHC00172	476	6	SPep	0	Similar to FhAE00307	X				x

* Signal P results indicating prediction of a signal peptide or a signal anchor
** Number of predicted transmembrane domains as predicted by THMMM is indicated
*** Presence of a putatively relevant blast hit in different taxons is indicated. Hits below e^-10 represented by a lowercase x, under e^-50 by uppercase X, and e^-100 in bold X.
Columns headings are FHE (F. hepatica adult stage), TRE (other trematoda), CES (cestoda), TUR (turbellaria), CND (cnidaria), LTZ (lophotrochozoa), ECZ (ecdysozoa), DTS (deuterostomia)

ISSN: 1471-2164