Table 3 Pfam domains of interest identified in P. marinus EST cluster open reading frames.

Protease

Peptidase_C1

Papain family cysteine protease

PF00112

Pm02598, Pm05550, Pm02598, Pm01528, Pm00748, Pm00174, Pm00175, Pm00188, Pm01093, Pm02540, Pm00187

Peptidase_C13

Asparaginyl peptidase

PF01650

Pm03639

Peptidase_C14

Caspase

PF00656

Pm00713

Peptidase_C15

Pyroglutamyl peptidase

PF01470

Pm03835

Peptidase_C26

Gamma-glutamyl hydrolase

PF07722

Pm03998, Pm00516, Pm01387

Peptidase_C48

UIp1 protease family, C-terminal catalytic domain

PF02902

Pm03070

Peptidase_C54

Peptidase family C54

PF03416

Pm01837

Peptidase_C69

Peptidase family C69

PF03577

Pm00327, Pm01089, Pm00100, Pm00136

Peptidase_M1

Peptidase family M1

PF01433

Pm04612

Peptidase_M14

Zinc carboxy peptidase

PF00246

Pm04493

Peptidase_M16

Insulinase

PF00675

Pm05750, Pm04910, Pm01740, Pm00611, Pm01740, Pm07103

Peptidase_M17

Cytosol amino peptidase

PF00883

Pm05788, Pm04421

Peptidase_M18

Aminopeptidase I zinc metalloprotease

PF02127

Pm00540

Peptidase_M20

Peptidase family M20

PF01546

Pm05166

Peptidase_M24

Metallopeptidase family M24

PF00557

Pm00721, Pm05108, Pm01923, Pm01484, Pm03328, Pm05608, Pm01369

Peptidase_M3

Peptidase family M3

PF01432

Pm06832

Peptidase_M41

Peptidase family M41

PF01432

Pm06918

Peptidase_M48

Peptidase family M48

PF01435

Pm02186

Peptidase_S10

Serine carboxy peptidase

PF00450

Pm04952, Pm03877, Pm07791, Pm01720, Pm07092, Pm05386, Pm02482, Pm07066, Pm02294, Pm00207, Pm00346, Pm06037

Peptidase_S15

X-Pro dipeptidyl peptidase

PF02129

Pm01961

Peptidase_S24

Peptidase S24 like

PF00717

Pm02936, Pm07617

Peptidase_S8

Subtilase family

PF00082

Pm05197, Pm00155, Pm01368, Pm00344, Pm00265, Pm02193, Pm03660, Pm00235, Pm00154

Peptidase_S9

Prolyl oligo peptidase family

PF00326

Pm01915

Rhomboid

Rhomboid-like family

PF01694

Pm05706, Pm00872

Oxidative Enzymes

Sod_Fe_N

Iron/manganese superoxide dismutase, alpha-hairpin

PF00081

Pm00420, Pm05057, Pm02278

Sod_Fe_C

Iron/manganese superoxide dismutase, C-terminal domain

PF02777

Pm00420, Pm05057, Pm02278

Glutaredoxin

Glutaredoxin

PF00462

Pm07679, Pm07604, Pm04790, Pm04765

Thioredoxin

Thioredoxin

PF00085

Pm01390, Pm02808, Pm00345, Pm02770, Pm07686, Pm03543, Pm01102, Pm00367, Pm03381, Pm01163, Pm03631, Pm07411, Pm02203, Pm03850, Pm05817

Fatty Acid Synthesis

FA_desaturase

Fatty acid desaturase

PF00487

Pm02182, Pm03006, Pm06024, Pm07340, Pm02313, Pm02648, Pm03710, Pm03609

Isoprenoid Pathway

IspD

MEP cytidylyl transferase

PF01128

Pm05015

Glycosyl transferase Family

Glyco_transf_20

Trehalose-6-phosphate transferase

PF00982

Pm01181

Glyco_transf_22

Alg9-like mannosyl transferase

PF03901

Pm03101

Glyco_transf_28

UDP-N-acetylglucosamine transferase

PF03033

Pm01717

Glyco_transf_8

Lipopolysaccharide galactosyl tranferase

PF01501

Pm01991

Alg14

Oligosaccharide biosynthesis protein Alg14-like

PF08660

Pm04341

Heat Shock Proteins

HSP90

Heat shock protein 90

PF00183

Pm00142, Pm00170, Pm00836, Pm03154

HSP70

Heat shock protein 70

PF00012

Pm00172, Pm05287, Pm00172, Pm03153, Pm05233, Pm06933, Pm00065, Pm00137, Pm01460, Pm00363, Pm01884

Cpn60_TCP1

HSp60 chaperonin family and the TCP-1 family

PF00118

Pm03177, Pm02627, Pm01137, Pm02465, Pm00825, Pm03422, Pm04033, Pm02165, Pm01657, Pm05905

Lectins

Ricin_B_lectin

Ricin-type beta-trefoil domain

PF00652

Pm01439, Pm02264, Pm03133

Lectin_leg_like

Legume -like lectin family

PF03388

Pm03024, Pm03327

Nucleotide Metabolism

Pribosyltran Adenylsucc_synt

Phosphoribosyl transferase adenylosuccinate synthetase

PF00156

Pm04986, Pm07718, Pm03005

PF00709

Pm02370