Table 3 Gene ontology (GO) categories significantly overrepresented in bovine copy number variations
From: Identification of copy number variations and common deletion polymorphisms in cattle
| Group | GO Term | Count | P-value |
|---|---|---|---|
| Gene | cytoplasm | 73 | 7.62E-10 |
| intracellular part | 95 | 7.74E-09 | |
| cytoplasmic part | 52 | 9.79E-08 | |
| intracellular organelle | 81 | 3.74E-07 | |
| organelle | 81 | 3.74E-07 | |
| intracellular | 100 | 3.76E-07 | |
| developmental process | 31 | 2.14E-06 | |
| intracellular membrane-bound organelle | 70 | 3.87E-06 | |
| membrane-bound organelle | 70 | 3.93E-06 | |
| binding | 130 | 5.64E-06 | |
| cell differentiation | 22 | 1.70E-05 | |
| cellular developmental process | 22 | 1.70E-05 | |
| negative regulation of cellular process | 16 | 2.27E-05 | |
| multicellular organismal development | 22 | 4.24E-05 | |
| regulation of apoptosis | 12 | 4.28E-05 | |
| regulation of programmed cell death | 12 | 4.87E-05 | |
| negative regulation of biological process | 16 | 5.02E-05 | |
| intracellular organelle part | 40 | 5.89E-05 | |
| cell development | 17 | 6.14E-05 | |
| organelle part | 40 | 6.36E-05 | |
| protein binding | 61 | 8.41E-05 | |
| apoptosis | 14 | 1.06E-04 | |
| programmed cell death | 14 | 1.17E-04 | |
| biological regulation | 47 | 1.72E-04 | |
| organelle membrane | 22 | 1.90E-04 | |
| regulation of cellular process | 41 | 2.02E-04 | |
| death | 14 | 2.37E-04 | |
| cell death | 14 | 2.37E-04 | |
| regulation of biological process | 43 | 2.62E-04 | |
| DNA replication | 8 | 2.67E-04 | |
| multicellular organismal process | 25 | 6.73E-04 | |
| calmodulin binding | 6 | 7.07E-04 | |
| anatomical structure development | 17 | 8.08E-04 | |
| cell cycle | 12 | 9.23E-04 | |
| Nearby gene | multicellular organismal process | 19 | 6.90E-07 |
| regulation of biological quality | 11 | 2.98E-05 | |
| cell morphogenesis | 6 | 5.63E-04 | |
| cellular structure morphogenesis | 6 | 5.63E-04 | |
| cellular morphogenesis during differentiation | 4 | 7.67E-04 |
