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Table 2 Genes missing in the sequenced clinical isolates for which no transposon mutants are availablea.

From: Evolutionary conservation of essential and highly expressed genes in Pseudomonas aeruginosa

Locus ID

Psae1152/2162

Psae1747/2136

PADJ-1

PADJ-2

PADJ-3

normalized read depthb

PA0637

0/0 (absent)

1.20/0.99 (present)

0.40

0.13

0.29

PA2387

0.18/0.18 (absent)

0.19/0.11 (absent)

0.26

0.89

0.47

PA2565

1.30/1.32 (present)

0/0 (absent)

0.79

0.89

0.47

  1. a Within the scope of the two comprehensive libraries [13, 14].
  2. b Genes were assumed to be absent if the normalized read depth was below 0.25. In the pooled sequence data sets, the read depth gives only a rough estimate for the fraction of strains that harbor the gene.