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Table 2 General features of the E. faecium genomes.

From: Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island

Features E980 E1039 E1071 E1162 E1636 E1679 U0317
Coverage of sequence 19.1× 24.4× 19.9× 20.0× 19.3× 16.7× 17.0×
Average sequence read length 240.0 246.0 254.3 256.7 237.6 239.8 235.6
Number of contigs 131 124 96 139 223 340 227
Number of assembled bases 2792626 2503230 2700770 2711396 2838335 2928184 2893029
Contig N50 (bp) 52826 46767 91386 50721 38772 20200 31583
Largest contig (bp) 145466 151666 228099 153370 152616 150593 162623
G + C content, % 38.1 38.0 37.9 38.0 37.8 37.7 37.7
Protein coding DNA, % 86.4 85.0 85.9 86.3 85.9 85.7 85.8
Number of predicted CDS 2869 2587 2714 2694 2940 3043 2965
Average gene length 841 822 855 869 830 824 837
Bases with quality score <20, % 0.051 0.035 0.027 0.034 0.104 0.196 0.155
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