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Table 1 Summary of sRNAs sequences from WT and MT sweet orange

From: Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type

Category Distinct signatures Total signatures Mean frequencies
  WT MT WT MT WT MT
matching protein-coding gene       
   sense 13811 (6.80%) 18142 (5.66%) 244819 (13.67%) 346569 (10.36%) 17.73 19.10
   antisense 8281 (4.08) 10651 (3.32%) 120749 (6.74%) 162839 (4.87%) 14.58 15.29
non-protein-coding RNAs       
   snoRNA 13 (0.01%) 14 (0.01%) 471 (0.03%) 149 (0.01%) 36.23 10.64
   snRNA 39 (0.02%) 104 (0.03%) 261 (0.01%) 859 (0.03%) 6.69 8.26
   tRNA 647 (0.32%) 1301 (0.41%) 21932 (1.22%) 73778 (2.21%) 33.90 56.71
   rRNA 2747 (1.35%) 3772 (1.18%) 59535 (3.33%) 99252 (2.97%) 21.67 26.31
miRNAs       
   known 667 (0.33%) 802 (0.25%) 61993 (3.46%) 87455 (2.61%) 92.94 109.05
   novel 83 (0.04%) 111 (0.03%) 4084 (0.23%) 11463 (0.34%) 49.20 103.27
other sRNAs 176677 (87.05%) 285546 (89.11%) 1276551 (71.30%) 2563382 (76.62%) 7.23 8.98
total 202965 (100%) 320443 (100%) 1790395 (100%) 3345746 (100%) 8.82 10.44