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Table 2 Potential novel miRNA genes from sweet orange

From: Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type

miRNA ID Sequences (5'-3') WT counta MT counta Fold change Precursor Unigene ID Start, end miRNA star
csi-novel-01 UUUUUCGGCAACAUGAUUUCU 2.8 0.0   EY671768 607, 764 Yes
csi-novel-02 UGGAGGCAGCGGUUCAUCGAUC 4.5 3.3 1.4 EY681703 286,417 Yes
csi-novel-03 UAGAUAAAGAUGAGAGAAAAA 220.1 1248.5 5.7 EY683731 19,166 Yes
csi-novel-04 UUCAAGAAAUCUGUGGGAAG 8.9 0.0   EY714194 255, 397 Yes
csi-novel-05 UGAAGGGCCUUUCUAGAGCAC 90.5 29.6 3.1 CN182895 123, 285 Yes
csi-novel-06 UUCCCUAGUCCCCCUAUUCCUA 11.2 1.5 7.5 CX051199 168, 263 Yes
csi-novel-07 GGAAUGUUGUCUGGCUCGAGG 12.3 4.8 2.6 EY672989 141, 318 Yes
csi-novel-08 AGUGGGAGCGUGGGGUAAGAAG 287.1 369.1 1.3 EY676411 137, 282 Yes
csi-novel-09 UUGAGUUCUGCAAGCCGUCGA 0.0 2.7   EY712260 398, 498 Yes
csi-novel-10 AGGUCAUCUUGCAGCUUCAAU 27.9 4.5 6.2 EY739655 272, 634 Yes
csi-novel-11 UGGACAGAGAAAUCACGGUCA 591.5 132.7 4.5 TC19570 105, 191 Yes
csi-novel-12 GCAGCGUCCUCAAGAUUCACA 15.1 4.5 3.4 TC23189 300, 444 Yes
  1. a count was normalized as transcripts per million (TPM).