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Table 3 The regression model for %ID and sequence characteristics vs. hybridization ratio [hybridization ratio ~%ID * (%GC + length + % align))] includes the interaction of GC content, probe length, and percent alignment of D. melanogaster probe sequence to D. yakuba sequence.

From: Using comparative genomic hybridization to survey genomic sequence divergence across species: a proof-of-concept from Drosophila

 

Estimate

Std. Error

t value

P value

Min

Max

1 SD

(Intercept)

-21.7825

1.1968

-18.2001

5.43E-73

   

%ID

0.2018

0.0130

15.4977

1.25E-53*

73.48

100

3.67

GC

0.1538

0.0166

9.2395

2.91E-20*

123

1839

150.47

Length

-0.0005

0.0006

-0.8412

0.4002

23.77

76.19

5.29

%align

0.0309

0.0084

3.6692

2.44E-04*

6.40

118.46

8.90

%ID:GC

-0.0015

0.0002

-8.0096

1.26E-15*

   

%ID:length

1.88E-06

6.49E-06

0.2902

0.7716

   

%ID:%align

-0.0002

9.16E-05

-1.7257

0.0844

   
  1. Min: minimum value; Max: maximum value; 1 SD: 1 standard deviation. *significant at P < 0.05.
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BMC Genomics

ISSN: 1471-2164

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